Pairwise Alignments

Query, 341 a.a., transcriptional regulator repressor from Agrobacterium fabrum C58

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  139 bits (350), Expect = 1e-37
 Identities = 97/340 (28%), Positives = 169/340 (49%), Gaps = 11/340 (3%)

Query: 3   LKQLSQLLGISQTTISRALNGYPEVSAETRRRVMEAAEKTGYRPNAAAQRLATGKVGSIG 62
           +K ++QL G+S  T+SRAL    +VS+ TR+RV EA  + GY PN+ A+ L   +  +I 
Sbjct: 4   MKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIV 63

Query: 63  LVMPIGEHHRSDVHFGEFLSGLGEEASRSGFHLVIMPTEPENERD-ALRGLAASGSVDGI 121
            ++P       D +F E + G+ + A   G+ +++  +  +  R+ +   L  +   DG+
Sbjct: 64  AIVP----DICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGM 119

Query: 122 YLAYMKNNDP-RIAMMQSLSLPFLVHGRSVGVEEDYPYLDVDNEGAFHDATQLLLQLGHT 180
            L  +  + P  ++  +  +LP +V       E + P + +DN  +  +A   L QLGH 
Sbjct: 120 LL--LGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHK 177

Query: 181 RIGLLNGPEGYDFTYRRCLGVEKALAANGLSLHPDNKRHSSMTDEEGYLGMEALLSRPEK 240
           RI  ++GP+       R  G ++AL   G++++P        T E G   +  LL+ PE+
Sbjct: 178 RIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQ 237

Query: 241 PTAILCASTALALGAIRSLNQRGLKPGRDISLIAHDDVLPLLKPDNFSVPLTTTRSSLRA 300
           PTAI C +  +A+GAI+   + GL+  +D+S++  DD+      D    PLTT       
Sbjct: 238 PTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCD---PPLTTISQPRYE 294

Query: 301 AGVRVGQRLINRIKLNQTEPHQELWKAELVVRASTGPAPK 340
            G +    ++  ++ +       L + +LVVR S  P  K
Sbjct: 295 IGRQAMLMMLELLRGHDVRAGSRLLETKLVVRESAAPPSK 334