Pairwise Alignments

Query, 341 a.a., transcriptional regulator repressor from Agrobacterium fabrum C58

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (278), Expect = 2e-29
 Identities = 93/343 (27%), Positives = 161/343 (46%), Gaps = 26/343 (7%)

Query: 3   LKQLSQLLGISQTTISRALNGYPEVSAETRRRVMEAAEKTGYRPNAAAQRLATGKVGSIG 62
           +  + +L G+S+ T+SR LN   +V A+TR  V+ A ++ GY+PN+ AQ LAT    SIG
Sbjct: 13  INDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTNSIG 72

Query: 63  LVMPIGEHHRSDVHFGEFLSGLGEEASRSGFHLVIMPTE--PENERDALRGLAASGSVDG 120
           LV+P    H    +FG  L    + A ++G  L++M ++   + E++A+  LAA    D 
Sbjct: 73  LVLP----HFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQ-RCDA 127

Query: 121 IYLAYMKNNDPR-IAMMQSLSLPFLVHGRSVGVEEDYPYLDVDNEGAFHDATQLLLQLGH 179
           I L     N+ + + + Q    P ++  R +   + + +  +D       A Q LL LGH
Sbjct: 128 ILLYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSF-GLDQTQIAQLAMQHLLNLGH 186

Query: 180 TRIGLLNGPEGYDFTYRRCLGVEKALAANGLSLHPDNKRHSSMTDEEGYLGMEALLSRPE 239
            +I  +  P   +    R    ++AL   G+ L          T   GY  M+ LL +  
Sbjct: 187 RQIACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGI 246

Query: 240 KPTAILCASTALALGAIRSLNQRGLKPGRDISLIAHDDVLPLLKPDNFSVPLTTTRSSLR 299
             TA+   +  +ALGA+R++++ G+   + +S+I  D+         F++P      SL 
Sbjct: 247 SMTAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNE----PAAAFAIP------SLS 296

Query: 300 AAGVRVGQRLINRIKL-------NQTEPHQELWKAELVVRAST 335
           +  + +G+     I L          +    L++  L+ R ST
Sbjct: 297 SVSLPIGELTQQAISLAVEIANKKPQDAQHRLYQGSLIAREST 339