Pairwise Alignments

Query, 492 a.a., flagellar hook associated protein from Agrobacterium fabrum C58

Subject, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

 Score = 60.5 bits (145), Expect = 2e-13
 Identities = 57/303 (18%), Positives = 129/303 (42%), Gaps = 25/303 (8%)

Query: 4   TSAMNTAQSIFNNTGKQTDVTSKNIANVGNANYVKRTAILGTTM----------AGASIV 53
           T ++ TAQ   N TG        NI+NV    Y +++ I GT             G  + 
Sbjct: 10  TQSVLTAQRQLNTTG-------HNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVHVE 62

Query: 54  SNGRAQNESLLRQTISSSSLASGQSSVLSGLEEIKSIFGGNNYESSPANYMKELLKSLDG 113
           +  R+ ++  +++   +S+  + +      L+ +  +      +  P N + E   S+  
Sbjct: 63  NVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPEN-LNEWFDSVKS 121

Query: 114 YAAKPSDAALAATAVTSASDVASSLNNASSELQGMRLRADKEMSLQVDKLNGLLAKFEEA 173
            A  P+D       +  +  ++ +LN+    ++  +   +K ++L V+++N L  +  + 
Sbjct: 122 LADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRDL 181

Query: 174 NNEVKAQTAIGGDASDALDQRETLLKDISSIVGINVVNRPNND-VALYTTDGATLFEIVP 232
               +    + G  +D +D+ E L+ ++S    + V  R + +   ++  +G TL     
Sbjct: 182 Q---RLMMRVPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTE 238

Query: 233 RSVTFKTQPGYDATTTGNAIYIDGVALKAGTGTNTTAAGSLQGLMQVRDDLAPTMQSQLD 292
            S   +   G+  T       ++G ALKA +  +    G ++ ++ +RD+  P +  ++ 
Sbjct: 239 AS-QLRVIDGFPDTQQHRLAMVEGKALKAISARD--IGGKMEAILDMRDEHIPYLMDEVG 295

Query: 293 EIA 295
            +A
Sbjct: 296 RLA 298



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 10/47 (21%), Positives = 29/47 (61%)

Query: 442 ERSAKSYSNNTAVSLDEELSLLMDIEQSYKAATKLVTTVDEMLKSLM 488
           E +    ++ + V+LDEE + +M  +Q+Y A+++++   ++   +++
Sbjct: 575 EAAQSRIASISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTIL 621