Pairwise Alignments

Query, 360 a.a., flagellar biosynthetic protein from Agrobacterium fabrum C58

Subject, 376 a.a., flagellar biosynthesis protein FlhB from Vibrio cholerae E7946 ATCC 55056

 Score =  182 bits (463), Expect = 1e-50
 Identities = 118/354 (33%), Positives = 200/354 (56%), Gaps = 15/354 (4%)

Query: 4   DQDKDSKTEDPTEKKLRDAAEKGNLPFSREVPIFASSLAFYCYLVFFLPEGAGRLGVTLK 63
           + D   +TE+ T ++L+ A EKG +  S+E+   +  +     L++F    A  L V ++
Sbjct: 3   ESDGQERTEEATPRRLQQAKEKGQVARSKELASVSVLVVGAVSLMWFGEILAKGLMVAMQ 62

Query: 64  DLF--GQPEQWNLSTRPDALALLYFLGTSVAYLLMPAMI----MFIVFGLASSFLQNLPS 117
            LF   + E ++L        L   +G S+  LL+P ++    +FI   + ++ +  + S
Sbjct: 63  RLFELSREEIFDLGK------LFDIIGGSLVNLLLPLLMILSTLFIAALIGAAGVGGI-S 115

Query: 118 PVLERVRPQWSRISPAKGFTRIYSKQGFVEFAKSVFKIMIVSIIMFFALRGDFYSLIDLM 177
              E   P+ S+++P  G  R++  Q +VE  KS+ K+++VS + F+ +      L  L 
Sbjct: 116 FSAEAAMPKLSKMNPLSGLKRMFGMQSWVELLKSILKVLLVSGVAFYLIEASQKDLFQLS 175

Query: 178 FSD-PQVIFVRVVEIVKKMMVVILLSTALLAAVDVLWTRHHWFSQLKMTKHEVKEEYKQS 236
               PQ IF   ++I+   +++I  S  ++ A+D+ +       QLKMTK EVK+EYK +
Sbjct: 176 LDVYPQNIF-HALDILLNFVLLISCSLLVVVAIDIPFQIWQHAEQLKMTKQEVKDEYKDT 234

Query: 237 QGDPVVKSRQRSIARDRARRRMINNVPRATLVIANPTHFAVALRYVREEGDAPVVVAKGQ 296
           +G P VK R R + R+ A+RRM+  +P+A ++I NP HF+VALRY +    APVV+AKG 
Sbjct: 235 EGKPEVKGRIRMLQREAAQRRMMAALPQADVIITNPEHFSVALRYKQNTDKAPVVIAKGV 294

Query: 297 DLIALKIRQIAEENNIPVFEDPPLARSMFAQVSVDSVIPPVFYKAVAELVHRVY 350
           D +ALKIR+IA E +I +   PPLAR+++    ++  IP   + AVA+++  V+
Sbjct: 295 DHMALKIREIAREYDIAIVPAPPLARALYHTTELEQQIPDGLFVAVAQVLAFVF 348