Pairwise Alignments

Query, 290 a.a., flagellar motor protein from Agrobacterium fabrum C58

Subject, 283 a.a., flagellar motor stator protein MotA from Pseudomonas stutzeri RCH2

 Score =  213 bits (543), Expect = 3e-60
 Identities = 111/282 (39%), Positives = 171/282 (60%), Gaps = 10/282 (3%)

Query: 4   VIGLIITFGCIIGGYMAMGGHLNVLVQPFELMIIGGAGLGGFIMANP----MKVVKDSGK 59
           +IG+I+ F  ++GG++  GG +  L+ PFE+MIIGGA LGGF+ ANP    M V K S K
Sbjct: 4   IIGIIVVFASVLGGFVLSGGKIGALIHPFEVMIIGGAALGGFLQANPASTTMLVFKKSLK 63

Query: 60  ALGEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKN 119
                F H+      YL+VL +LYS++   R +    IEA +++P  S +F   P  L++
Sbjct: 64  MFSTRFTHAY-----YLEVLSLLYSILNKSRREGMMAIEADLEDPAASPLFSKYPGFLQD 118

Query: 120 KELTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVA 179
           + +T+F CDY+R++  GN   HE+E L D E+ ++  +   P HA+  + D  PA+GIVA
Sbjct: 119 ERMTAFTCDYLRIMSSGNMAPHELEGLFDMELNSLKEELEHPSHAVAKVADGLPAMGIVA 178

Query: 180 AVLGVIKAMGKINESPE-VLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLY 238
           AVLG++  M  + E+   ++G  +G+ALVGT LGI+ SY    PLA+ ++    ++  +Y
Sbjct: 179 AVLGIVITMSILAEADNAMIGYKVGSALVGTFLGILASYGFFGPLAAALEHDAKEELNVY 238

Query: 239 IIVKQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEM 280
             +K TL+A  +G  P +A+E+GRK +    RPS   +EQ M
Sbjct: 239 EAIKATLVASASGMPPTLAVEFGRKVLYPAHRPSFAELEQAM 280