Pairwise Alignments

Query, 290 a.a., flagellar motor protein from Agrobacterium fabrum C58

Subject, 289 a.a., chemotaxis protein MotA from Phaeobacter inhibens DSM 17395

 Score =  215 bits (547), Expect = 1e-60
 Identities = 108/279 (38%), Positives = 172/279 (61%), Gaps = 3/279 (1%)

Query: 4   VIGLIITFGCIIGGYMAMGGHLNVLVQ--PFELMIIGGAGLGGFIMANPMKVVKDSGKAL 61
           ++G+++ F  + GGY+  GG   ++++  PFE M+IGGAG+G F+++N M  VK + K L
Sbjct: 4   IVGIVVIFVMVFGGYLLAGGKFAIIIKALPFEFMMIGGAGVGAFLISNDMGGVKHTLKDL 63

Query: 62  GEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKE 121
           G+ FK    K  +Y D+L +L+SL+R  R     E+E HI++PE SS+F   P +L +KE
Sbjct: 64  GKVFKGPKWKPDDYRDLLCLLFSLIRIARANPV-EVEQHIEDPENSSVFNRYPKILADKE 122

Query: 122 LTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAAV 181
             + I D +R   +     H++E ++++ IE  LH  L   HA+ ++ D  PA+GIVAAV
Sbjct: 123 AVNLISDTMRSASMNYDDPHQVEEVLEKRIEANLHHALHSSHALQSLADGLPALGIVAAV 182

Query: 182 LGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYIIV 241
           LG+IK MG I++ PEVLG LIG ALVGT LG+ L+Y +  P A +VK V  +    Y ++
Sbjct: 183 LGIIKTMGSIDQPPEVLGKLIGGALVGTFLGVFLAYGLVGPFAGKVKSVVEEDAHFYSLI 242

Query: 242 KQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEM 280
           ++ L+A ++     + +E GR+   ++ RP    +E  +
Sbjct: 243 REVLVANLHNHAAAICIEVGRQNTPSHIRPGFSELEDAL 281