Pairwise Alignments

Query, 290 a.a., flagellar motor protein from Agrobacterium fabrum C58

Subject, 289 a.a., chemotaxis protein MotA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  194 bits (493), Expect = 2e-54
 Identities = 96/279 (34%), Positives = 171/279 (61%), Gaps = 3/279 (1%)

Query: 4   VIGLIITFGCIIGGYMAMGGHLNVLVQ--PFELMIIGGAGLGGFIMANPMKVVKDSGKAL 61
           +IG+++ F  + GGY+A GG + ++++  PFE+ +IGGA +G F++ N M  +K + K +
Sbjct: 4   IIGIVVVFVMVFGGYLAAGGKMGIILKSLPFEMTMIGGAAVGAFVIGNDMSGIKHTLKDV 63

Query: 62  GEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKE 121
            + FK      ++Y D+L +L+ L+R L  ++   +E HI++P  S+IF   P ++ ++E
Sbjct: 64  KKVFKGPTWLAQDYKDLLCLLFELIR-LARQNPVGLEEHIEDPAASNIFSKYPKIMADRE 122

Query: 122 LTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAAV 181
               I D +R   +     H++E ++++ IE+     +   HA+ T+ D  PA+GIVAAV
Sbjct: 123 AIDLIADTMRSAAMNYDDPHQVEEVLEKRIESNHEHAMHGSHALQTVADGLPALGIVAAV 182

Query: 182 LGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYIIV 241
           LGVIK MG I++ PE+LG LIG ALVGT LG+ L+Y +  P +++VK V  +    Y+++
Sbjct: 183 LGVIKTMGSIDQPPEILGKLIGGALVGTFLGVFLAYGLVGPFSAKVKSVVEEDAHFYLLI 242

Query: 242 KQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEM 280
           ++ L+A ++       +E GR+   ++ RP+   +E+ +
Sbjct: 243 REVLVANLHKHTVNNCIEVGRQNTPSHIRPTFSDLEEAL 281