Pairwise Alignments

Query, 290 a.a., flagellar motor protein from Agrobacterium fabrum C58

Subject, 288 a.a., chemotaxis motA protein from Caulobacter crescentus NA1000

 Score =  210 bits (534), Expect = 3e-59
 Identities = 101/279 (36%), Positives = 172/279 (61%), Gaps = 2/279 (0%)

Query: 4   VIGLIITFGCIIGGYMAMGGHLNVLVQ--PFELMIIGGAGLGGFIMANPMKVVKDSGKAL 61
           +IG+++ F  + G Y+  GG ++V++   P ELM IGGAG+  F++ N + V+K +    
Sbjct: 4   IIGIVLLFAMVFGSYIMAGGKMDVIIHAAPHELMAIGGAGVAAFLIGNSVTVIKATLGGF 63

Query: 62  GEAFKHSVPKERNYLDVLGVLYSLMRDLRTKSRNEIEAHIDNPEESSIFQSAPSVLKNKE 121
           G  FK    K ++Y D+L +L+ L + +++K    +EAHI+ P ES+IF   P +  +  
Sbjct: 64  GTIFKGPKWKAQDYRDLLSLLFLLTKTMKSKGVIALEAHIEKPHESTIFSRYPKIAHDHF 123

Query: 122 LTSFICDYVRLIIIGNARSHEIEALMDEEIETILHDKLKPYHAITTMGDSFPAIGIVAAV 181
              FICD +R++ +     H++E  M++++E   H+     HA+T + D  PA+GIVAAV
Sbjct: 124 AVDFICDTLRMMTMNLEDPHQVEDAMEKQLEKHHHEAHGAAHALTQLSDGLPALGIVAAV 183

Query: 182 LGVIKAMGKINESPEVLGGLIGAALVGTMLGIILSYSICNPLASQVKIVRTKQHRLYIIV 241
           LGVIK MG I E P VLG +IG ALVGT +G+ ++Y +  P+A+++  V  + H  Y I+
Sbjct: 184 LGVIKTMGSITEPPAVLGTMIGGALVGTFMGVFMAYGLVGPMATRLGGVLDEDHNFYKII 243

Query: 242 KQTLIAYMNGSVPQVALEYGRKTISNYERPSIDAVEQEM 280
           +  L+A+++G+  Q+++E GR  + +  +PS   +E+ +
Sbjct: 244 QAVLVAHLHGNAAQISVEIGRGNVPSAYQPSFAELEEAL 282