Pairwise Alignments

Query, 244 a.a., flagellar basal body rod protein from Agrobacterium fabrum C58

Subject, 242 a.a., fagellar hook-basal body proteins from Pseudomonas stutzeri RCH2

 Score = 85.1 bits (209), Expect = 1e-21
 Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 9/242 (3%)

Query: 6   YVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVSQGNDY 65
           Y A+++       L   S+N+ANVNT GFR    +   +  + +   +  +A +   N+ 
Sbjct: 6   YTAMTAASRTMMSLQVRSNNLANVNTPGFRADLERAQAVAVEGYGYDSRHMALIE--NNG 63

Query: 66  LSTRQGAFEQTGNSFDFAIKGDAWFALDTPDGQILTRDGRFTMRPDGALISSSGYPVLDA 125
           +S   G    TG   DFA+KG     L   +G+  TR G   +  +G L + +G  VL  
Sbjct: 64  VSLAAGPMVATGRELDFAVKGTGLIVLQDGEGEAYTRQGSMQVDAEGRL-TLNGRAVLGE 122

Query: 126 GGGPIRLNPNGGPITVGLDGAIR---QNDTIAASLG-IFQADFSKGFLRHPNSGVKPVAQ 181
           GG PI L P    + +G DG +      D + A +  I   D     L    +G+     
Sbjct: 123 GG-PIVL-PEYDRMEIGNDGTVSVMAPGDWMMAEVDRIRLVDVPAANLMKNQAGLLVTRD 180

Query: 182 PVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTESTFGEGIKTLG 241
             P   + +V +  G+LE SNV+ I ++   + +NR FE+   MM+  E     G + + 
Sbjct: 181 GEPAQPSEDVRLASGFLESSNVSAIDELASTMSLNRLFETQVKMMKAAEDLSDAGNRMIR 240

Query: 242 GA 243
           G+
Sbjct: 241 GS 242