Pairwise Alignments

Query, 244 a.a., flagellar basal body rod protein from Agrobacterium fabrum C58

Subject, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 67/238 (28%), Positives = 106/238 (44%), Gaps = 10/238 (4%)

Query: 1   MQSGLYVALSSQIALERRLTTISDNMANVNTVGFRGSEVKFDEMVAKNHNDMNAKVAFVS 60
           M   L++A+S      + +   ++N+ANV+T GFR    +   M A     + ++V  ++
Sbjct: 1   MDRALFLAMSGAKQNMQAMQLRANNLANVSTTGFRADLAQARSMQAYGEG-LPSRVFSMT 59

Query: 61  QGNDYLSTRQGAFEQTGNSFDFAIKGDAWFA-LDTPDGQILTRDGRFTMRPDGALISSSG 119
           +   + +  QG+   TG   D  I+GD W + LD    + LTR+G   +   G L++ +G
Sbjct: 60  ERPGH-NFAQGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLRIDETGLLLNGNG 118

Query: 120 YPVLDAGGGPIRLNPNGGPITVGLDGAIRQNDTIAASLGIFQADFSK-------GFLRHP 172
           +PVL   G PI L      + +G DG I      A +  +   D  K          +  
Sbjct: 119 HPVLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKLVRLNDQSLFKDV 178

Query: 173 NSGVKPVAQPVPVVNNHEVGVVQGYLEQSNVNGISQMTQLIQVNRAFESISSMMRDTE 230
           N   +          +  V ++ G LE SNVN I +MT LI + R FE    MM   E
Sbjct: 179 NGLFRATDPNTQFEADASVKILTGALEGSNVNAIGEMTSLIDLQRQFEMQVKMMSTAE 236