Pairwise Alignments

Query, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  297 bits (760), Expect = 6e-85
 Identities = 175/410 (42%), Positives = 245/410 (59%), Gaps = 22/410 (5%)

Query: 39  VAHGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIHLGEVVRVEPDICYVCPIE--- 95
           VA G  VR +     T+        +G   A  +  G  + EVV  + D+ Y+ PIE   
Sbjct: 25  VAEGQLVRVVGL---TLEASGCRAPVGSLCAIDTMGGELIAEVVGFDEDLLYLMPIEELK 81

Query: 96  ---PG---EPIGIHDTVIRKGAFRVSPDESWCGRTINALGEPIDGQGPLASGIVRRSISN 149
              PG    P+G   T I  G        S  GR ++  GEP+DG GPL +  +      
Sbjct: 82  GVLPGARVRPLG-EQTGIHVGM-------SLLGRVLDGGGEPLDGLGPLGTTDIAPRHGP 133

Query: 150 NAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLAKADAFDKV 209
              P + R+ +  P   G+RAI+    +  GQR+G+FAGSGVGKS LL M+ +    D +
Sbjct: 134 AINP-LARRPIHEPLDVGIRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTTADVI 192

Query: 210 VIALVGERGREVREFIEDTMG-DNMSKSVAVVATSDESPMLRKMAPLSAVTIAEHFRDQG 268
           V+ LVGERGREV+EFIE+ +G +  ++SV V A +D SP++R  A  ++  IAE+FRD G
Sbjct: 193 VVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIAEYFRDLG 252

Query: 269 DNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAGPGAEGTGTITA 328
            NVLL++DS+TR+A A RE+A+A GEPP  +GYP SVF +LPRL+ERAG G  G G+ITA
Sbjct: 253 FNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITA 312

Query: 329 IVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASISRLAKKAWTPDQ 388
             ++L +GD+  DPIAD+ R ILDGHIVL R+LA+ G YP I+  ASISR+A    +P  
Sbjct: 313 FYTVLTEGDDLQDPIADAARAILDGHIVLSRTLADSGHYPAIDIEASISRVAPMVISPAH 372

Query: 389 EKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLKQ 438
            + + R+K     +++ RDL  IG Y  G+DP +D A++  P +   L+Q
Sbjct: 373 LEAMRRVKQTYSLYQQNRDLISIGAYAAGSDPRIDNAIRLQPAMNAFLRQ 422