Pairwise Alignments

Query, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

Subject, 468 a.a., ATP synthase from Herbaspirillum seropedicae SmR1

 Score =  281 bits (719), Expect = 3e-80
 Identities = 164/377 (43%), Positives = 225/377 (59%), Gaps = 12/377 (3%)

Query: 91  VCPIEPGEP------IGIHDTVIRKGAFRVSPDESWCGRTINALGEPIDGQGPLASGIVR 144
           V P+EP  P      I        + + R+   E   GR ++  G P+D  GPL +    
Sbjct: 95  VYPVEPVRPPPRTGPISFTPRRADEHSRRLPVGEELLGRVLDGAGRPLDNLGPLHT---E 151

Query: 145 RS--ISNNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLAK 202
           RS  ++  A   + R  +     TG+RAI+    +  GQR+G+FAGSGVGKS LL M+A+
Sbjct: 152 RSAPLAVRAANPLGRAPIRDILDTGIRAINSMLTVGRGQRMGLFAGSGVGKSVLLGMMAR 211

Query: 203 ADAFDKVVIALVGERGREVREFIEDTMG-DNMSKSVAVVATSDESPMLRKMAPLSAVTIA 261
             + D +V+ L+GERGREV+EFIE  +G + +++SV V A +D  P++R        +IA
Sbjct: 212 YTSADVIVVGLIGERGREVKEFIEQILGAEGLARSVVVAAPADTPPLMRLQGAAYCTSIA 271

Query: 262 EHFRDQGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAGPGAE 321
           E+FRDQG +VLLI+DS+TR+A A RE+A+A GEPP  +GYP SVF +LP L+ERAG G E
Sbjct: 272 EYFRDQGKDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGDE 331

Query: 322 GTGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASISRLAK 381
           G G+ITA  ++L +GD+  DPIAD+ R ILDGHIVL+R LAE G YP I+   SISR   
Sbjct: 332 GGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRQLAEAGHYPAIDIEQSISRAMH 391

Query: 382 KAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLKQLPD 441
                + ++    LK L  RF+  RDL  +G Y  G+DP LD A+  +P +   L+Q   
Sbjct: 392 SITDAEHQRSSRHLKQLYSRFQRNRDLISVGAYAAGSDPILDEAIALLPRMEAFLQQGIH 451

Query: 442 EPAAQDAYADLATALRG 458
           E A         TAL G
Sbjct: 452 EQADVSESLRQLTALFG 468