Pairwise Alignments

Query, 262 a.a., flagellar basal-body rod protein from Agrobacterium fabrum C58

Subject, 249 a.a., flagellar basal-body rod protein FlgF from Vibrio cholerae E7946 ATCC 55056

 Score = 86.3 bits (212), Expect = 6e-22
 Identities = 74/257 (28%), Positives = 115/257 (44%), Gaps = 26/257 (10%)

Query: 2   RALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQAI 61
           RAL +A +G       +++ ANN+AN++TTG+   RA+           +G+P+R     
Sbjct: 3   RALFLAMSGAKQNMQAMQLRANNLANVSTTGF---RADLAQARSMQAYGEGLPSRVFSMT 59

Query: 62  VPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFQIEAADGSTLYSRAGAFN 121
              G N               QG++I TG  LD+ I G GW  +    G    +R G   
Sbjct: 60  ERPGHNFA-------------QGSVITTGRDLDITIQGDGWISVLDKTGKEGLTRNGNLR 106

Query: 122 KNADGNLVTVDGYNVIPN----INIPTDAQDITITRTGQVTARI-GNAADFTQLGQLTIA 176
            +  G L+  +G+ V+      I +P     + I   G ++ R  G  AD  ++      
Sbjct: 107 IDETGLLLNGNGHPVLGETGAPITLPVPLNKVEIGGDGTISVRPQGAPADAMEVVDRIKL 166

Query: 177 NFANEAGLKPLGDNLFSQTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITA 236
              N+  L    + LF  T     P      D S   +  + LEGSNV+A+ E+T LI  
Sbjct: 167 VRLNDQSLFKDVNGLFRATD----PNTQFEADASVKILTGA-LEGSNVNAIGEMTSLIDL 221

Query: 237 QRAYEMNSKVITTADEM 253
           QR +EM  K+++TA+EM
Sbjct: 222 QRQFEMQVKMMSTAEEM 238