Pairwise Alignments

Query, 262 a.a., flagellar basal-body rod protein from Agrobacterium fabrum C58

Subject, 260 a.a., flagellar basal-body rod protein FlgG (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  214 bits (545), Expect = 1e-60
 Identities = 112/262 (42%), Positives = 166/262 (63%), Gaps = 4/262 (1%)

Query: 1   MRALAIAATGMDAQQTNLEVIANNIANINTTGYKRARAEFTDLLYQTERMQGVPNRANQA 60
           MR+L  AATGM AQQ N++VI++N+AN+NT+G+K++RAEF DL+YQ  R+ G     +  
Sbjct: 2   MRSLWTAATGMVAQQLNIDVISHNLANVNTSGFKKSRAEFEDLMYQNMRIAGSATEGDSR 61

Query: 61  IVPEGANIGLGVQTSAVRNIHTQGNLIETGNKLDVAIIGQGWFQIEAADGSTLYSRAGAF 120
           I P G  +G+GV+ +AV    +QG+   +GN LD+AI G G+FQ+   +G   Y+RAGAF
Sbjct: 62  I-PVGIQVGMGVRPTAVHKFFSQGDFQNSGNPLDIAIEGDGFFQV-LVNGEPRYTRAGAF 119

Query: 121 NKNADGNLVTVDGYNVIPNINIPTDAQDITITRTGQVTARIGNAADFTQLGQLTIANFAN 180
             N DG +VT +GY + P   +P + +++ +T  G + A   N  +      + +  F N
Sbjct: 120 KLNQDGTVVTANGYVLQPEFTVPAETKNVVVTEAGHIAALDANGQELAA-ADIPLYTFIN 178

Query: 181 EAGLKPLGDNLFSQTPASGAPVVGVPDDPSYGYVKQSYLEGSNVDAVKEITDLITAQRAY 240
            AGL  +G NL+  + ASG  V GVP + + G + Q +LE SNV+ V E+ ++I  QRAY
Sbjct: 179 PAGLDAIGRNLYVPSEASGEAVEGVPGEDNVGTLAQGFLEMSNVEVVDEMVNMIVGQRAY 238

Query: 241 EMNSKVITTADEMASIVSKNLK 262
           EMNSK I+T+D+M    + NLK
Sbjct: 239 EMNSKAISTSDQMLQ-TAVNLK 259