Pairwise Alignments

Query, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 5/174 (2%)

Query: 3   SILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKALGA 62
           ++ TN +AM A   L     +L+T+ +R+SSG ++ SA D+AA   I+  + + ++ L  
Sbjct: 4   NVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDV 63

Query: 63  VSDALGMGAAKVDTASAGMDAAIKV---VTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQL 119
                  G +   TA   M+ +  +   + D+  +         ++  + EE   L D+L
Sbjct: 64  AMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDEL 123

Query: 120 KSIGTSASFNGENWLVSSANATKTVVSGFVRDA--GGTVSVKTTDYALDANSML 171
             I  + SF G   L  S       +     +A   G  SV+  D+ +   S +
Sbjct: 124 NRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFI 177



 Score = 40.4 bits (93), Expect = 7e-08
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 178 GTIDANSGILNATGATTTVGAKTYTQISVLDMNV-GTDDLDNALYSVETALTKMTSAGAK 236
           G  + + G+    G     G KT  Q    D+++       NA+  ++ AL  + S  A 
Sbjct: 254 GNFNISGGLATELGLNGGPGVKTTVQ----DIDITSVGGSQNAVGIIDAALKYVDSQRAD 309

Query: 237 LGSLSARIDLQSGFADKLSDTIEKGVGRLVDADMNEESTKLKALQTQQQLAIQALSIANS 296
           LG+   R+         + + +E    R+ D D  +E+T+L   Q  QQ     L+ A  
Sbjct: 310 LGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQQAGTSILAQAKQ 369

Query: 297 DSQNILSLFR 306
              + +SL +
Sbjct: 370 LPNSAISLLQ 379