Pairwise Alignments

Query, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

Subject, 377 a.a., flagellin C from Vibrio cholerae E7946 ATCC 55056

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 74/372 (19%), Positives = 132/372 (35%), Gaps = 70/372 (18%)

Query: 3   SILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKALGA 62
           ++ TN +AM A   L S  +   ++ +R+SSG K+ SA D+AA   I+  +   ++ LG 
Sbjct: 4   NVNTNVSAMTAQRYLTSATNAQQSSMERLSSGYKINSAKDDAAGLQISNRLNVQSRGLGV 63

Query: 63  VSDALGMGAAKVDTASAGMDAAIKVVT---DIKAKVVAAKEQGVDKTKVQEEVSQLLDQL 119
                  G +   TA   M     ++    D+  +         D+  +QEE++ L D+L
Sbjct: 64  AVRNANDGISMAQTAEGAMKETTNILQRMRDLSLQSANGSNSKADRVAIQEEITALNDEL 123

Query: 120 KSIGTSASFNG------------------------------------------------- 130
             +  + SF G                                                 
Sbjct: 124 NRVAETTSFGGNKLLNGTFATKSFQIGADNGEAVMLNIKDMRSDNALMGGKTYQAANGKD 183

Query: 131 ENWLVSSANATKTVVSGFVRDAGGTVSVKTTDYALDANSMLYTEGTP----GTIDANSGI 186
           +NW V +     T+     R+   T+S+   +         Y  G       ++D    +
Sbjct: 184 KNWGVEAGKTDLTITLKDKREGDVTISINAKEGDDIEELATYINGQTDMIKASVDEEGKL 243

Query: 187 LNATGATTTVGAKTYTQISVLDMNVGT------DDLD--------NALYSVETALTKMTS 232
              T      GA T+      ++ +G       D LD         ++  V+ AL  + S
Sbjct: 244 QLFTDNNRIDGAATFGGALAGELGIGAAQDVTVDTLDVTTVGGAQESVAIVDAALKYVDS 303

Query: 233 AGAKLGSLSARIDLQSGFADKLSDTIEKGVGRLVDADMNEESTKLKALQTQQQLAIQALS 292
             A+LG+   R +      D +++ +     R+ D D  +E+T L   Q   Q +   L+
Sbjct: 304 HRAELGAFQNRFNHAINNLDNINENVNASKSRIKDTDFAKETTALTKAQILSQASSSVLA 363

Query: 293 IANSDSQNILSL 304
            A     + L+L
Sbjct: 364 QAKQAPNSALAL 375