Pairwise Alignments

Query, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

Subject, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 78/377 (20%), Positives = 143/377 (37%), Gaps = 76/377 (20%)

Query: 3   SILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKALGA 62
           ++ TN +A+ A   L S +  L+ + +R+SSG ++ SA D+AA   I+  + +  + LG 
Sbjct: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63

Query: 63  VSDALGMGAAKVDTASAGMDAAIKV---VTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQL 119
                  G + + TA   M    ++   + D+  +         ++  +QEE++ L D+L
Sbjct: 64  AVRNANDGISIMQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAALNDEL 123

Query: 120 KSIGTSASFNGENWL------------VSSANATKTVVSGFVRDAGGTVSVKTTDYALDA 167
             I  + SF G   L             SS  A +  +     D   ++ +    Y   A
Sbjct: 124 NRIAETTSFAGRKLLNGQFMKASFQIGASSGEAVQLSLRNMRSD---SLEMGGFSYVAAA 180

Query: 168 NSMLYTEGTPGTIDANSGILNATG----------------------------ATTTVGAK 199
            +    + T G    N   +NA G                             + +V  K
Sbjct: 181 LADKQWQVTKGKQQLNISYVNAQGENENIQIQAKEGDDIEELATYINGKTDKVSASVNEK 240

Query: 200 TYTQISV------------------LDMNV----GTDDLD--------NALYSVETALTK 229
              Q+ +                  L MN+      D+LD         A+  ++TAL  
Sbjct: 241 GQLQLYIAGKETSGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRAVSVIDTALKY 300

Query: 230 MTSAGAKLGSLSARIDLQSGFADKLSDTIEKGVGRLVDADMNEESTKLKALQTQQQLAIQ 289
           +    ++LG++  R        D + + +     R+ DAD  +E+T++   Q  QQ++  
Sbjct: 301 VDGHRSELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTS 360

Query: 290 ALSIANSDSQNILSLFR 306
            L+ A    + +L L R
Sbjct: 361 VLAQAKRQPKFVLFLLR 377