Pairwise Alignments

Query, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 28/281 (9%)

Query: 3   SILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKALGA 62
           ++ TN  AM A   L    +   T+ +R+SSG K+ SA D+AA   I+  +   ++ L  
Sbjct: 4   NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63

Query: 63  VSDALGMGAAKVDTASAGMDAAIKV---VTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQL 119
                  G +   TA   M+    +   + D+  +         ++  +QEE++ L D+L
Sbjct: 64  AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123

Query: 120 KSIGTSASFNGENWLVSSANATKTVVSGFVRDAGGTVSVKTTDYALD-----ANSMLYTE 174
             I  + SF G N L++   +TK+   G   D G  V +   D   D       S +  E
Sbjct: 124 NRIAETTSFGG-NKLLNGTFSTKSFQIG--ADNGEAVMLTLKDMRSDNRMMGGTSYVAAE 180

Query: 175 GTPGTIDANSGI---------LNATGATTTVGAKTYTQISVLDMNV-GTDDLDNALYSVE 224
           G        +G          ++    T TV AK    I  +   + G  D+  A  + +
Sbjct: 181 GKDKDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEK 240

Query: 225 TAL------TKMTSAGAKLGSLSARIDLQSGFADKLSDTIE 259
             L       K+T   A  G L+  +++Q+G A+ + DTI+
Sbjct: 241 GQLQIFAGNNKVTGDVAFSGGLAGALNMQAGTAETV-DTID 280