Pairwise Alignments

Query, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

Subject, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 6/171 (3%)

Query: 3   SILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKALGA 62
           ++ TN +AM A   L   A  +  + +R+SSG K+ SA D+AA   I+  + S ++ L  
Sbjct: 4   NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63

Query: 63  VSDALGMGAAKVDTASAGMDAAIKV---VTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQL 119
                  G +   TA   M+    +   + D+  +         ++  +QEEVS L D+L
Sbjct: 64  AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123

Query: 120 KSIGTSASFNGENWLVSSANATKTVVSGFVRDAGGTVSVKTTDYALDANSM 170
             I  + SF G N L++ +  +K+   G   D+G  V +       D  +M
Sbjct: 124 NRIAETTSFGG-NKLLNGSFGSKSFQIG--ADSGEAVMLSMGSMRSDTQAM 171



 Score = 39.7 bits (91), Expect = 1e-07
 Identities = 62/277 (22%), Positives = 103/277 (37%), Gaps = 50/277 (18%)

Query: 32  SSGLKVGSASDNAAYWSIATTMRSDNKALGAVSDALGMGAAKVDTASAGMDAAIKVVT-- 89
           S   ++G+ S  A   S+ + MRSD +A+G  S     G A      A  D  +      
Sbjct: 144 SKSFQIGADSGEAVMLSMGS-MRSDTQAMGGKSYRAQEGKAADWRVGAATDLTLSYTNKQ 202

Query: 90  -DIKAKVVAAKEQGVDKTKVQEEVSQLLDQLKSIGTSASFNGENWLVSSANATKTVVSGF 148
            + +   + AK QG D   ++E  + +  Q + +  S   +G+  L +S+      V+G 
Sbjct: 203 GEAREVTINAK-QGDD---LEELATYINGQTEDVKASVGEDGKLQLFASSQK----VNGD 254

Query: 149 VRDAGGTVSVKTTDYALDANSMLYTEGTPGTIDANSGILNATGATTTVGAKTYTQISVLD 208
           V   GG                       G I  ++G                  ++V D
Sbjct: 255 VTIGGGL---------------------GGEIGFDAG----------------RNVTVAD 277

Query: 209 MNVGT-DDLDNALYSVETALTKMTSAGAKLGSLSARIDLQSGFADKLSDTIEKGVGRLVD 267
           +NV T      A+  ++ AL  + S  A LG+   R        D +++ +     R+ D
Sbjct: 278 VNVSTVAGSQEAVSILDGALKAVDSQRASLGAFQNRFGHAISNLDNVNENVNASRSRIRD 337

Query: 268 ADMNEESTKLKALQTQQQLAIQALSIANSDSQNILSL 304
            D   E+T +   Q  QQ +   L+ A       LSL
Sbjct: 338 TDYARETTAMTKAQILQQASTSVLAQAKQSPSAALSL 374