Pairwise Alignments

Query, 306 a.a., flagella associated protein from Agrobacterium fabrum C58

Subject, 273 a.a., flagellin domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 69/306 (22%), Positives = 127/306 (41%), Gaps = 42/306 (13%)

Query: 3   SILTNNNAMAALSTLRSIASDLSTTQDRISSGLKVGSASDNAAYWSIATTMRSDNKALGA 62
           ++ TN  +M A   L + + +L+T+ +R+SSGL++ SA D+AA  +I+  + S  + L  
Sbjct: 4   NVNTNVTSMKAQKNLNTSSQNLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEV 63

Query: 63  ----VSDALGMGAAKVDTASAGMDAAIKVVTDIKAKVVAAKEQGVDKTKVQEEVSQLLDQ 118
                +DA+ + A   + A       ++ + D+  +         D   +++E+ QL ++
Sbjct: 64  GMRNANDAISI-AQISEGAMQEQTNMLQRMRDLSIQSENGANSTADLQALKDEMDQLAEE 122

Query: 119 LKSIGTSASFNGENWLVSSANATKTVVSGFVRDAGGTVSVKTTDYALDANSMLYTEGTPG 178
           + +IG S +F     L    +A K    G       T+SV T                  
Sbjct: 123 ITAIGNSTAFGNTKLLTGEFSAGKLFQVGHQDGEDVTISVGT------------------ 164

Query: 179 TIDANSGILNATGATTTVGAKTYTQISVLDMNVGTDDLDNALYSVETALTKMTSAGAKLG 238
               N+G+L+    T    A                  D+A+  ++ A+  + +  AKLG
Sbjct: 165 ---LNAGVLSVNSLTVLTSA----------------GRDSAIGKIDAAIKVIDTQRAKLG 205

Query: 239 SLSARIDLQSGFADKLSDTIEKGVGRLVDADMNEESTKLKALQTQQQLAIQALSIANSDS 298
           ++  R+      +      +     R+VD D  +E++ +   Q  QQ     L+ AN   
Sbjct: 206 AVQNRLAHNISNSANTQANVADAKSRIVDVDFAKETSTMTKNQVLQQTGSAMLAQANQLP 265

Query: 299 QNILSL 304
           Q  LSL
Sbjct: 266 QVALSL 271