Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 379 a.a., flagellin A from Vibrio cholerae E7946 ATCC 55056

 Score = 69.3 bits (168), Expect = 1e-16
 Identities = 85/382 (22%), Positives = 145/382 (37%), Gaps = 70/382 (18%)

Query: 3   SIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSS 62
           ++ TNV+AM+A + L      + ++  R+SSG R+  A D+AA   I+  + + +  L  
Sbjct: 4   NVNTNVSAMTAQRYLTKATGELNTSMERLSSGNRINSAKDDAAGLQISNRLTAQSRGLDV 63

Query: 63  VSDALGLGAAKVDTASAGMSSAIDV---VKEIKAKLVTATEEGVDRTKVQEEIGQLQKQL 119
                  G +   TA   M+ +  +   ++++  +    T    +R  + EE   LQ +L
Sbjct: 64  AMRNANDGISIAQTAEGAMNESTSILQRMRDLALQSANGTNSASERQALNEESVALQDEL 123

Query: 120 ASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGF--VRAS----GG----AVSVTT 169
             I++  SF G   L G     +   G+   ++++ G   VRA     GG    A    T
Sbjct: 124 NRIAETTSFGGRKLLNGSFGEASFQIGSSSGEAIIMGLTSVRADDFRMGGQSFIAEQPKT 183

Query: 170 TKYALDNTATG------------------------------------NVLFGSVDGTG-- 191
            ++ +  TA                                      ++   SVD  G  
Sbjct: 184 KEWGVPPTARDLKFEFTKKDGEAVVLDIIAKDGDDIEELATYINGQTDLFKASVDQEGKL 243

Query: 192 -----TPDASGILGTVGTFTTV--------AAQSVYTLDITQYAAADRATNMAEALTLVE 238
                 P+  G     G   T            +V  +DIT    +  A  + +A     
Sbjct: 244 QIFVAEPNIEGNFNISGGLATELGLNGGPGVKTTVQDIDITSVGGSQNAVGIIDA----- 298

Query: 239 NSLKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQ 298
            +LK + S  A LG+   R+       S + ++VE    R+ D D  +E+T+L   Q  Q
Sbjct: 299 -ALKYVDSQRADLGAKQNRLSHSISNLSNIQENVEASKSRIKDTDFAKETTQLTKSQILQ 357

Query: 299 QLGVQALSIANSNSESILSLFR 320
           Q G   L+ A     S +SL +
Sbjct: 358 QAGTSILAQAKQLPNSAISLLQ 379