Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 378 a.a., flagellin E from Vibrio cholerae E7946 ATCC 55056

 Score = 54.3 bits (129), Expect = 5e-12
 Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 11/141 (7%)

Query: 3   SIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIA----TTMRSDNM 58
           ++ TNV+A+ A + L S  + +  +  R+SSG R+  A D+AA   I+    T MR   +
Sbjct: 4   TVNTNVSALVAQRHLNSASEMLNQSLERLSSGNRINSAKDDAAGLQISNRLETQMRGLGI 63

Query: 59  ALSSVSDALGLGAAKVDTASAGMSSAIDV---VKEIKAKLVTATEEGVDRTKVQEEIGQL 115
           A+ + +D + +    + TA   M     +   ++++  +    +    +R  +QEE+  L
Sbjct: 64  AVRNANDGISI----MQTAEGAMQETTQLLQRMRDLSLQSANGSNSAAERVALQEEMAAL 119

Query: 116 QKQLASISQGASFYGENWLVG 136
             +L  I++  SF G   L G
Sbjct: 120 NDELNRIAETTSFAGRKLLNG 140



 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 6/131 (4%)

Query: 190 TGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENSLKAMTSAAA 249
           +GT   SG L        +  ++V  LDI+    A RA      +++++ +LK +    +
Sbjct: 253 SGTLSFSGSLANELQMNLLGYEAVDNLDISSAGGAQRA------VSVIDTALKYVDGHRS 306

Query: 250 KLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLGVQALSIAN 309
           +LG++  R          + +++     R+ DAD  +E+T++   Q  QQ+    L+ A 
Sbjct: 307 ELGAMQNRFQHAISNLDNVHENLAASNSRIKDADYAKETTQMIKQQILQQVSTSVLAQAK 366

Query: 310 SNSESILSLFR 320
              + +L L R
Sbjct: 367 RQPKFVLFLLR 377