Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 377 a.a., flagellin D from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 6e-18
 Identities = 82/378 (21%), Positives = 145/378 (38%), Gaps = 68/378 (17%)

Query: 3   SIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSS 62
           ++ TNVAAM+A + L       +++  R+SSG ++  A D+AA   I+  +   +  L  
Sbjct: 4   NVNTNVAAMTAQRYLTGATNAQQTSMERLSSGFKINSAKDDAAGLQISNRLNVQSRGLDV 63

Query: 63  VSDALGLGAAKVDTASAGMSSAIDV---VKEIKAKLVTATEEGVDRTKVQEEIGQLQKQL 119
                  G +   TA   M+   ++   ++++  +    +    +R  +QEEI  L  +L
Sbjct: 64  AVRNANDGISIAQTAEGAMNETTNILQRMRDLSLQSANGSNSKSERVAIQEEITALNDEL 123

Query: 120 ASISQGASFYGENWLVGVSTLGAATPGTDPDKSVV---------------AGFVRASG-- 162
             I++  SF G   L G  +  +   G D  ++V+                 +V A G  
Sbjct: 124 NRIAETTSFGGNKLLNGTFSTKSFQIGADNGEAVMLTLKDMRSDNRMMGGTSYVAAEGKD 183

Query: 163 -------GAVSVTTTKYAL---DNTATGN------------------------------- 181
                  GA  +T T   +   D T T N                               
Sbjct: 184 KDWKVQAGANDITFTLKDIDGNDQTITVNAKEGDDIEEVATYINGQTDMVKASVNEKGQL 243

Query: 182 -VLFGSVDGTGTPDASGILGTVGTFTTVAAQSVYTLDITQYAAADRATNMAEALTLVENS 240
            +  G+   TG    SG L          A++V T+D+T    A       +++ +++++
Sbjct: 244 QIFAGNNKVTGDVAFSGGLAGALNMQAGTAETVDTIDVTSVGGAQ------QSVAVIDSA 297

Query: 241 LKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQL 300
           LK + S  A+LG+   R          ++++V     R+ D D  +E+T L   Q   Q 
Sbjct: 298 LKYVDSHRAELGAFQNRFNHAISNLDNINENVNASKSRIKDTDFAKETTALTKSQILSQA 357

Query: 301 GVQALSIANSNSESILSL 318
               L+ A     + LSL
Sbjct: 358 SSSVLAQAKQAPNAALSL 375