Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 376 a.a., flagellin B from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 80/371 (21%), Positives = 138/371 (37%), Gaps = 55/371 (14%)

Query: 3   SIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMALSS 62
           ++ TNV+AM+A + L      M+ +  R+SSG ++  A D+AA   I+  + S +  L  
Sbjct: 4   NVNTNVSAMTAQRYLNGAADGMQKSMERLSSGYKINSARDDAAGLQISNRLTSQSRGLDM 63

Query: 63  VSDALGLGAAKVDTASAGMSSAIDV---VKEIKAKLVTATEEGVDRTKVQEEIGQLQKQL 119
                  G +   TA   M+   ++   ++++  +    +    +R  +QEE+  L  +L
Sbjct: 64  AVKNANDGISIAQTAEGAMNETTNILQRMRDLALQSSNGSNSSSERRAIQEEVSALNDEL 123

Query: 120 ASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGF------VRASG----------- 162
             I++  SF G   L G     +   G D  ++V+          +A G           
Sbjct: 124 NRIAETTSFGGNKLLNGSFGSKSFQIGADSGEAVMLSMGSMRSDTQAMGGKSYRAQEGKA 183

Query: 163 -----GAVSVTTTKYALDNTATGNVLFGSVDGTG-----------TPDASGILGTVGTFT 206
                GA +  T  Y         V   +  G             T D    +G  G   
Sbjct: 184 ADWRVGAATDLTLSYTNKQGEAREVTINAKQGDDLEELATYINGQTEDVKASVGEDGKLQ 243

Query: 207 TVAAQSVYTLDIT---------------QYAAAD----RATNMAEALTLVENSLKAMTSA 247
             A+      D+T                   AD          EA+++++ +LKA+ S 
Sbjct: 244 LFASSQKVNGDVTIGGGLGGEIGFDAGRNVTVADVNVSTVAGSQEAVSILDGALKAVDSQ 303

Query: 248 AAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKALQTQQQLGVQALSI 307
            A LG+   R G        ++++V     R+ D D   E+T +   Q  QQ     L+ 
Sbjct: 304 RASLGAFQNRFGHAISNLDNVNENVNASRSRIRDTDYARETTAMTKAQILQQASTSVLAQ 363

Query: 308 ANSNSESILSL 318
           A  +  + LSL
Sbjct: 364 AKQSPSAALSL 374