Pairwise Alignments

Query, 320 a.a., flaB from Agrobacterium fabrum C58

Subject, 394 a.a., flagellin B protein from Sinorhizobium meliloti 1021

 Score =  235 bits (599), Expect = 2e-66
 Identities = 130/194 (67%), Positives = 150/194 (77%), Gaps = 9/194 (4%)

Query: 1   MTSIITNVAAMSALQTLRSIGQNMESTQARVSSGLRVGDASDNAAYWSIATTMRSDNMAL 60
           MTSI+TN+AAM+ALQTLR+IG NME TQA VSSGLRVG A+DNAAYWSIATTMRSDNMAL
Sbjct: 1   MTSILTNIAAMAALQTLRTIGSNMEETQAHVSSGLRVGQAADNAAYWSIATTMRSDNMAL 60

Query: 61  SSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQKQLA 120
           S+V DALGLGAAKVDTA +GM SAI+VVKEIKAKLV ATE+GVD+ K+QEEI QL+ QL 
Sbjct: 61  SAVQDALGLGAAKVDTAYSGMESAIEVVKEIKAKLVAATEDGVDKAKIQEEIDQLKDQLT 120

Query: 121 SISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVTTTKYALDNTATG 180
           SI++ ASF GENWL    + G  T      KSVV  FVR +GGAVSV    Y+L+   T 
Sbjct: 121 SIAEAASFSGENWLQADLSGGPVT------KSVVGSFVRDAGGAVSVKKVDYSLN---TN 171

Query: 181 NVLFGSVDGTGTPD 194
           +VLF +   TG  D
Sbjct: 172 SVLFDTAGNTGILD 185



 Score =  133 bits (335), Expect = 6e-36
 Identities = 106/266 (39%), Positives = 140/266 (52%), Gaps = 33/266 (12%)

Query: 58  MALSSVSDALGLGAAKVDTASAGMSSAIDVVKEIKAKLVTATEEGVDRTKVQEEIGQLQK 117
           +++  V  +L   +   DTA  G +  +D V  +    VT     V+ T  +  +G    
Sbjct: 159 VSVKKVDYSLNTNSVLFDTA--GNTGILDKVYNVSQASVTLPVN-VNGTTSEYTVGAYNV 215

Query: 118 QLASISQGASFYGENWLVGVSTLGAATPGTDPDKSVVAGFVRASGGAVSVT--TTKYALD 175
               I   A+F G+   VG   L            V A  V A+G  V     TTK+ +D
Sbjct: 216 D-DLIDASATFDGDYANVGAGALAGDYVKVQ-GSWVKAVDVAATGQEVVYDDGTTKWGVD 273

Query: 176 NTATGNVLFGSVDGTGTPDASGILGTVGTFTTVAAQ-SVYTLDITQYAAADRATNMAEAL 234
            T TG                         T VAA  S+ T+DIT    A +A N+   +
Sbjct: 274 TTVTG----------------------APATNVAAPASIATIDIT---IAAQAGNLDALI 308

Query: 235 TLVENSLKAMTSAAAKLGSLSMRIGLQEDFASKLSDSVEKGIGRLVDADMNEESTRLKAL 294
             V+ +L  MTSAAA LGS++MRI LQ DF +KLSDS++ G+GRLVDADMNEESTRLKAL
Sbjct: 309 AGVDEALTDMTSAAADLGSIAMRIDLQSDFVNKLSDSIDSGVGRLVDADMNEESTRLKAL 368

Query: 295 QTQQQLGVQALSIANSNSESILSLFR 320
           QTQQQL +Q+LSIANS SE++L+LFR
Sbjct: 369 QTQQQLAIQSLSIANSASENVLTLFR 394