Pairwise Alignments

Query, 566 a.a., flagellar M-ring protein from Agrobacterium fabrum C58

Subject, 295 a.a., Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) from Pseudomonas fluorescens FW300-N2E2

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 5/155 (3%)

Query: 57  LYVGLEKSDLNKISIALAESGLDF--QVGTDGSSLQVPVGLTSKARLLLAERGLPDSANA 114
           L+  L + D N++   LA   ++   QV  DG ++ V     + A  +L   GLP  + +
Sbjct: 24  LHSHLSEQDANEVIAELANKNVEASKQVDKDGLTVLVEPADMNSAVQVLEAAGLPRRSRS 83

Query: 115 GY-ELFDNVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGVSAARVHIVLPDVGNFRRGE 173
              E+F   G +  T   +    + AL  E+  ++ QIDGV  ARVH+VLP+        
Sbjct: 84  SLGEIFRKEGVIS-TPMEERARYIYALSQELESTLSQIDGVVLARVHVVLPERVAPGEPV 142

Query: 174 QKPTASVMIRASASAGRKA-SASIRHLVASAVPGL 207
           Q  +ASV I+ + +    + +  +R+LVAS +PG+
Sbjct: 143 QPASASVFIKHTRALDPDSITPRVRNLVASGIPGM 177