Pairwise Alignments

Query, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

Subject, 748 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

 Score =  387 bits (995), Expect = e-112
 Identities = 267/737 (36%), Positives = 393/737 (53%), Gaps = 72/737 (9%)

Query: 2   ESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAFAHVFETTLDCVRSNKLEP 61
           E  LL+L     D + +N +FRA+H++KG AG F L  LV F H  E+ L  VR  +   
Sbjct: 26  EEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVNFTHHLESLLMKVREGQQAL 85

Query: 62  TQDVLKVMLRSAD---VLADLTNAARDGGSVDESRTRGLVKELEALANGEAVPASAPAPV 118
           T  +L ++LR  D    + +L +A      VDE+R  GL+    AL + E  P     P+
Sbjct: 86  TPVLLDLLLRGLDEINAMVELIDADSGELPVDEARHAGLIA---ALTSHEVSPL---IPL 139

Query: 119 AVKAPEPVKAPAAPKPTDESGFEPIPFSFSDFADETTPLMEVPTFQITFKPHASLYSKGN 178
            V  P+  KA                       D+     +   + I+ +    + + G 
Sbjct: 140 TVIEPDACKAFGR-------------------LDKCANCDQEAAWHISLRLQPEILANGF 180

Query: 179 EAALLLRDLSRIGDMSVNCDMSD--LPALDKLDPEASYLSWTVSIATEKGEEGIRSVFEF 236
           + A  LR LSR+GD+ +  ++ D  LPAL  +DPE+ YL   + + T   +  I  VFEF
Sbjct: 181 DPASFLRYLSRLGDI-LQLELIDDALPALADIDPESCYLGMEIDLCTTASKAEIEEVFEF 239

Query: 237 AEWDCDLEITA----------VVSDASADEEELPMIPVPFDL-SALDGDAQDEPAVATPA 285
               C L I            ++ D    ++++  I V   L + L+ D       A   
Sbjct: 240 IREFCTLRILPPNAALEDYLQLIHDLPETDQKIGRILVASGLLTELELDQALRLQAADAQ 299

Query: 286 MEDAYVAATVEAAVATTQIAQSVNAAIEKREAAAAPAAAQANANAAANASAGQTIRVDLD 345
                 +  VE  +     AQ VNAA+ K          Q       N    Q IRV   
Sbjct: 300 QPRPLGSVLVEQGMVP---AQGVNAALAK----------QQTVREKRNQEHSQ-IRVAAH 345

Query: 346 RVDRLINLVGELVINQAMLS-QSVIENDAS---GTSAVNMGLDELQQLTREIQDSVMAIR 401
           ++D LINLVGELVI+ A    ++ ++ DA+    T  VN+ +++       I+++ + +R
Sbjct: 346 KLDELINLVGELVISAAGAQLRAQLKGDAACIESTQTVNLHVEQ-------IREAALKLR 398

Query: 402 AQPVKPVFQRMSRIVREVADMIGKQIRLVTEGENTEVDKTVIDKLAEPLTHMIRNAVDHG 461
              +   F R  R+VR+V+  +GK IRL  +G +TE+DK VID+LA+PLTH++RNA+DHG
Sbjct: 399 MIEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGADTELDKAVIDRLADPLTHLVRNAIDHG 458

Query: 462 IETPEKREAAGKNPEGTIKLSAKHRSGRILIELQDDGAGINRERVRQKAIDNDLIAADAN 521
           IE  E+R AAGK  EG ++L A H SG I+IE+ DDG G+N +R+R+KAI   LI A AN
Sbjct: 459 IEPAEQRLAAGKPAEGHLRLDAYHESGMIVIEVADDGRGLNTQRIREKAIARGLIDAQAN 518

Query: 522 LTDEEIDNLIFAPGFSTADKISDISGRGVGMDVVKRSIQALGGRISISSRPGLGSTFTMS 581
           L+D ++  LIFA GFSTAD +SD+SGRGVGMDVV+ +I AL G I I SRPG G TF + 
Sbjct: 519 LSDHDVQMLIFAAGFSTADNVSDLSGRGVGMDVVRSAIDALRGTIEIDSRPGAGCTFRIR 578

Query: 582 LPLTLAVLDGMVVTVAGQTLVVPLTAIVETLQPEAKNIHSFGSNQRLISIRNSFCPLVDV 641
           LPLTLA++DG ++++     V+PL  + E L+ EA  +   G+    + +R    PL  +
Sbjct: 579 LPLTLAIIDGFLISLGDDYFVIPLDMVTECLELEADQLD--GAAYGYLDLRGR--PLPCL 634

Query: 642 GRVLNFRPTQADPVEGVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPGIAAA 701
               +F+  +A P +   ++V S G  Q  L+VD + G+ Q VIK L   + H+ GI  +
Sbjct: 635 SLAAHFKLREA-PSKRRNIIVVSHGRQQAGLIVDHLHGELQTVIKPLGQLFQHLQGIGGS 693

Query: 702 TILGDGRVALILDVDAI 718
           TILG G+VALILD+ ++
Sbjct: 694 TILGSGQVALILDIPSL 710