Pairwise Alignments

Query, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

Subject, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  306 bits (785), Expect = 2e-87
 Identities = 237/774 (30%), Positives = 366/774 (47%), Gaps = 92/774 (11%)

Query: 5   LLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAFAHVFETTLDCVRSNKLEPTQD 64
           L++L +   D + +NA+FR  H++KGGAG   L +LV   H  E   D +R+ +   +  
Sbjct: 28  LVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETCHGAENVFDILRNGQRHVSPS 87

Query: 65  VLKVMLRSADVLADLTNAARDGGSVDESRTRGLVKELEALANGEAVPASAPAPVAVKAPE 124
           ++  ML++ D + +   A ++   +  +    L+ EL  L+     PAS     A +A  
Sbjct: 88  LMDTMLKALDTVNEQFRAVQEREPLQPADPE-LLDELHRLSK----PASEDEDEAAEAH- 141

Query: 125 PVKAPAAPKPTDESGFEPIPFSFSDFADETTPLMEVPTFQITFKPHASLYSKGN------ 178
                   +P +E   E I     D  +E  P +E    ++T    + +  KG+      
Sbjct: 142 ------FDEPEEELVEEIIEEVVEDVVEEAVPNVET---EVTASASSGVIDKGSIDDINE 192

Query: 179 -EAALLLRDL----------------------SRIGDMSVNCDMSDL------------- 202
            E   LL +L                      + + +  +N D++D              
Sbjct: 193 DEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTNSDLNGDITDDEFEKLLDQLHGKG 252

Query: 203 --PALDKLDPEASYLSWTVSIATEKGEEGIRSVFEFAEWDCDLEITAVV-----SDASAD 255
             P+++   P A     T            +S     +   D E   ++     S     
Sbjct: 253 KGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLMTDEEFEKLLDELHGSGKGPS 312

Query: 256 EEELPMIPVPFDLSALDGDAQDEPAVATPAMEDAYVAATVEAAVATTQIAQSVNAAIEKR 315
            EEL M   P   S +  DA+     + P+ + A       AA            A+ K 
Sbjct: 313 VEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAA---------KPAVAKE 363

Query: 316 EAAAAPAAAQ----------ANANAAANASAGQTIRVDLDRVDRLINLVGELV-INQAML 364
           E A APA A           A A  A  A    T+RVD   +D ++N+VGELV +   +L
Sbjct: 364 EPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRLL 423

Query: 365 SQSVIENDASGTSAVNMGLDELQQLTREIQDSVMAIRAQPVKPVFQRMSRIVREVADMIG 424
           S  +  ND   + AV      L  +T ++Q +VM  R QP+K VF R  R+VR++A  + 
Sbjct: 424 SLGLNSNDEEMSKAVA----NLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLN 479

Query: 425 KQIRLVTEGENTEVDKTVIDKLAEPLTHMIRNAVDHGIETPEKREAAGKNPEGTIKLSAK 484
           K+I L   GE T++DK +++ LA+PL H++RN+VDHGIE P++R   GK+  G + LSA 
Sbjct: 480 KEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSAS 539

Query: 485 HRSGRILIELQDDGAGINRERVRQKAIDNDLIAADA--NLTDEEIDNLIFAPGFSTADKI 542
                I + + DDGAG++ +++R  A+   ++  DA   LT++E  NLIF PGFS+ +KI
Sbjct: 540 QEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKI 599

Query: 543 SDISGRGVGMDVVKRSIQALGGRISISSRPGLGSTFTMSLPLTLAVLDGMVVTVAGQTLV 602
           +DISGRGVGMDVVK +I  L G I I S  G G+  T+ +PLTLA+L  ++V VAG    
Sbjct: 600 TDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFA 659

Query: 603 VPLTAIVETLQPEAKNIHSFGSNQRLISIRNSFCPLVDVGRVLNFRPTQADPVEGVALLV 662
           +PL ++ E    + +  +     Q  I +R    PL  +   L  +  +    +G   +V
Sbjct: 660 LPLASVNEIFHLDLRRTNVV-DGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVV 718

Query: 663 ESEGGGQR-ALMVDAIQGQRQVVIKSLEANYTHVPGIAAATILGDGRVALILDV 715
             + G QR  L+VD + GQ +VVIK L+      PG++ ATI  DG +ALILDV
Sbjct: 719 IVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDV 772