Pairwise Alignments

Query, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

Subject, 761 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

 Score =  281 bits (720), Expect = 7e-80
 Identities = 216/761 (28%), Positives = 366/761 (48%), Gaps = 62/761 (8%)

Query: 4   GLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAF---AHVFETTLDCVRSNKLE 60
           GLL L     D   +N +FR +H++KG +G   LD++  F   AH  E  +  VR   + 
Sbjct: 22  GLLALEANPDDKAIINELFREIHTVKGASGI--LDNIAPFTQLAHRMEDLMQKVRDGHVA 79

Query: 61  PTQDVLKVMLRSAD---VLADLTNAARDGGSVDESRTRGLVKELEALANGEAVPASAPAP 117
               +L +ML   D   +  +     ++  +   S ++ ++ +L  L   +A P   P P
Sbjct: 80  LNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLAPLT--QAAPTHTPTP 137

Query: 118 VAVKAPEPVKAPAAPKPTDESGFEPIPFSFSDFADETTPLMEVP-TFQITFKPHASLYSK 176
            AV A E     +  + T+  G         D  ++   L+E P    + + P    +  
Sbjct: 138 -AVAAQEETATLSISELTELLG--------RDCFNDVEALLEHPDALLLIYTPDKQCFFS 188

Query: 177 GNEAALLLRDLSRIGDMSVNCDMSDLPALDKLDPEASYLSWTVSIATEKGEE--GIRSVF 234
           G++    +R + ++    V   + D    D    +  +L  T S   +  ++   I   +
Sbjct: 189 GDDPLAWMRSVEKVSWRKVVL-IPDSEPFDTYQAQMQFLLLTQSAKKDLEQQLAPIEGQY 247

Query: 235 EFAEWDCDLEITAVVSDASADEEELPMIPVPFDLSALDGDAQDEPAVATP--AMEDAYVA 292
                  D   TA +   +   E +    V   ++ L  +   E   A    ++++ Y A
Sbjct: 248 RLYRIQSDNLPTAPIDQRTQYVERI----VKQQIALLREEQVSESVRAGTFLSIKNLYCA 303

Query: 293 ATVEAAVATTQIAQSVNA-------------------AIEKRE-AAAAPAAAQANANA-A 331
            + + +     + +SV+A                    I+K E   A P+A   N     
Sbjct: 304 LSQQISDRPAPLPESVSADELITLFDNILLSFAHRTAIIDKCENEPAQPSAITVNEQLDK 363

Query: 332 ANASAGQTIRVDLDRVDRLINLVGELVINQAMLSQSVIENDASGTSAVNMGLDELQ---- 387
                 +T++VD ++VD L++LVGEL++  A  S   +   A     V     +++    
Sbjct: 364 VKKKQIKTLKVDQEKVDLLMDLVGELIV--AKNSMQYLAYRAENEFGVRKLAQDIKAEQS 421

Query: 388 ---QLTREIQDSVMAIRAQPVKPVFQRMSRIVREVADMIGKQIRLVTEGENTEVDKTVID 444
              +L  ++Q  VM +R  P+  VFQR  R++R+++  +GKQ+ L+ EGE+TE DK++++
Sbjct: 422 VISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKSIVE 481

Query: 445 KLAEPLTHMIRNAVDHGIETPEKREAAGKNPEGTIKLSAKHRSGRILIELQDDGAGINRE 504
            L+EPL H+IRNA+DHGIE+P+ R   GKNP G I LSA      ++I++ DDG G++ E
Sbjct: 482 DLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGVDVE 541

Query: 505 RVRQKAIDNDLIAAD--ANLTDEEIDNLIFAPGFSTADKISDISGRGVGMDVVKRSIQAL 562
           RV+ KA++  L+ A     ++ +EI +LIF PGFST +++SD+SGRGVGMD V+ +I+  
Sbjct: 542 RVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAIERN 601

Query: 563 GGRISISSRPGLGSTFTMSLPLTLAVLDGMVVTVAGQTLVVPLTAIVETLQPEAKNIHSF 622
           GG +++SS PG GS  TM LPL++ +   M+  +  Q+  +P+ ++++TL+         
Sbjct: 602 GGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKDIRR 661

Query: 623 GSNQRLISIRNSFCPLVDVGRVLNFRPTQADPVEGVALLVESEGGGQRALMVDAIQGQRQ 682
             N     +R    P++ + R       Q  P +   +LV   G     L VD +Q  + 
Sbjct: 662 VKNLDTFILRGETVPILYLKRAFEMNSAQIYP-DIQPILVVRVGDDVLGLAVDRLQEGQD 720

Query: 683 VVIKSLEANYTHVPGIAAATILGDGRVALILDVDAIVSASR 723
           V+IK LE           A I+GDGRV L+LD + +V  +R
Sbjct: 721 VIIKPLEGALATFSIYRGAAIMGDGRVLLVLDTEEVVKHAR 761