Pairwise Alignments

Query, 737 a.a., Chemotaxis protein histidine kinase from Agrobacterium fabrum C58

Subject, 686 a.a., CheA signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  452 bits (1164), Expect = e-131
 Identities = 260/724 (35%), Positives = 405/724 (55%), Gaps = 76/724 (10%)

Query: 1   MESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDLVAFAHVFETTLDCVRSNKLE 60
           MES LLKL+    DPE +N +FRA HSIKGG+G FG + +  + H+ ET LD +R  + E
Sbjct: 23  MESELLKLDIAAPDPEAINTIFRAAHSIKGGSGTFGFNQVANYTHLLETLLDEIRDGRRE 82

Query: 61  PTQDVLKVMLRSADVLADLTNAARDGGSVDESRTRGLVKELEA-LANGEAVPASAPAPVA 119
            T     ++L S D+L ++ +A     + D+     L ++  A L+ GE+          
Sbjct: 83  MTSHHQDILLLSVDLLRNMLDAVMHQQTFDDPMLSDLEQKFAAELSQGES---------- 132

Query: 120 VKAPEPVKAPAAPKPTDESGFEPIPFSFSDFADETTPLMEVPTFQITFKPHASLYSKGNE 179
            +  E  + P  P+ T                          T+QI+FK    +   GN+
Sbjct: 133 -QEDETQREPETPEQT--------------------------TWQISFKAGTDILRYGND 165

Query: 180 AALLLRDLSRIGDMSVNCDMSDLPALDKLDPEASYLSWTVSIATEKGEEGIRSVFEFAEW 239
             L+  +L + G++SV     ++P   + DPEA YL+W++++ T++    ++  FE+ E 
Sbjct: 166 PLLMFNELGQCGELSVELLPQEIPDFTQYDPEACYLAWSLTLTTDQPLSRLKEAFEWVED 225

Query: 240 DCDLEITAVVSDASADEEELPMIPVPFDLSALDGDAQDEPAVATPAMEDAYVAATVEAAV 299
           +CD+                            D  AQ + + A+    +  + AT E+ +
Sbjct: 226 ECDI----------------------------DYQAQPKASEASEITTEKEIEATAESDI 257

Query: 300 -ATTQIAQSVNAAIEKREAAAAPAAAQANANAAANASAGQTIRVDLDRVDRLINLVGELV 358
            A+TQ     +   EK  +   P+   +    A +      IRV ++++D LIN+VGELV
Sbjct: 258 QASTQTTTPASVQPEKPASQTRPSVVSSKTQDAGS------IRVSIEKIDLLINMVGELV 311

Query: 359 INQAMLSQSVIENDASGTSAVNM--GLDELQQLTREIQDSVMAIRAQPVKPVFQRMSRIV 416
           I QAML Q   + + +  S + M  GL++L   TR++Q+SVM IR  P+   F R  R+V
Sbjct: 312 ITQAMLGQIGQQEEMTPESFITMKQGLEQLASHTRDLQESVMQIRMLPISFAFNRFPRLV 371

Query: 417 REVADMIGKQIRLVTEGENTEVDKTVIDKLAEPLTHMIRNAVDHGIETPEKREAAGKNPE 476
           R++   +GK++ L+ +GE+TE+DKTV++K+ +P+ H++RN++DHG+ETPE R   GK   
Sbjct: 372 RDIGQQLGKKVELILKGEDTELDKTVMEKIVDPMVHLVRNSLDHGLETPEVRRQKGKPET 431

Query: 477 GTIKLSAKHRSGRILIELQDDGAGINRERVRQKAIDNDLIAADANLTDEEIDNLIFAPGF 536
           GT+ L+A H+ G I+IE+ DDGAG+N +++  KA    L+ +D  L++E I  LIF PGF
Sbjct: 432 GTLTLNAFHQGGNIIIEIIDDGAGLNTQKILDKARAKGLVGSDEELSEEAIHQLIFKPGF 491

Query: 537 STADKISDISGRGVGMDVVKRSIQALGGRISISSRPGLGSTFTMSLPLTLAVLDGMVVTV 596
           STA+ +SD+SGRGVGMDVV R+I  L G I + S    GS FT+ LPLTLA+LDG +V +
Sbjct: 492 STAETVSDLSGRGVGMDVVLRNIHELNGTIELKSTQDKGSRFTIRLPLTLAILDGQLVRI 551

Query: 597 AGQTLVVPLTAIVETLQPEAKNIHSFGSNQRLISIRNSFCPLVDVGRVLNFRPTQADPVE 656
              T VVPL AI E+L+  A +I+       +I +R+ + P++ V    +         +
Sbjct: 552 GTHTYVVPLVAIHESLEVPAAHINRLSEEHEVIRLRDEYLPVLKVYEAFHHEADAKQIKD 611

Query: 657 GVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPGIAAATILGDGRVALILDVD 716
           G+ ++V++    +  L+VD +  Q+QVVIKSLE NY+ V GI+ ATILGDG VALI+D+ 
Sbjct: 612 GLVMVVDA-NNDKVGLLVDELLSQQQVVIKSLEDNYSKVAGISGATILGDGTVALIIDIA 670

Query: 717 AIVS 720
            +VS
Sbjct: 671 GLVS 674