Pairwise Alignments

Query, 598 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) from Pseudomonas fluorescens FW300-N2E2

 Score =  589 bits (1519), Expect = e-173
 Identities = 301/600 (50%), Positives = 396/600 (66%), Gaps = 10/600 (1%)

Query: 1   MPVYKAPVKDTLFILNDVLGLER-YNNLPGFEDATP-DMIEAITGEAAKLAEERLFPLNL 58
           M  YKAP++D  F+LN+V  + + +  LP   DA   + +EAI  EA K+  + + PL+ 
Sbjct: 1   MADYKAPLRDMRFVLNEVFEVAKLWAQLPALADAVDAETVEAILEEAGKVTSKSIAPLSR 60

Query: 59  SGDQQGCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMS 118
           + D++GC  AD G+V+ P GF  AY  Y EGGW+G+     +GG G+P  + A + E ++
Sbjct: 61  AADEEGCHWAD-GAVTTPAGFPQAYKTYAEGGWVGVGGDPVYGGMGMPKAVSAQVEEMVN 119

Query: 119 SANLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLR 178
           SA+LS  +YP LT GA  ++  H ++E K  YLP M  G W+G+M LTEPH GTDLG++R
Sbjct: 120 SASLSFGLYPMLTAGACLSINAHASEELKAAYLPNMYAGVWAGSMCLTEPHAGTDLGIIR 179

Query: 179 TKAVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVK 238
           TKA PQ DGSYK+SG KIFI+ GEH +T+NI+HLV+A++  AP G KGISLF+VPKF+V 
Sbjct: 180 TKAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFMVN 239

Query: 239 EDGTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLG 298
            DG+LG RN   CG+IEHKMGI  +ATCVMN+D+A GYL+G  NKGL+AMF MMN  RLG
Sbjct: 240 ADGSLGARNAANCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNKGLAAMFTMMNYERLG 299

Query: 299 VGLQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNE 358
           VG+QGL+ GE +YQNA+EYARDR+Q RS +GA+  DK ADPIIVHPD+RR L+T+KA NE
Sbjct: 300 VGIQGLASGERSYQNAIEYARDRLQSRSPTGAQNKDKVADPIIVHPDVRRMLLTMKASNE 359

Query: 359 AGRAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGG 418
            GRAF  + A+Q D A  + D   R+ A+DL+ L+TP+ K  LTD G +  V  QQVFGG
Sbjct: 360 GGRAFSTYVAMQLDTAKFSEDPVTRKRAEDLVALLTPVAKAFLTDLGLETTVHGQQVFGG 419

Query: 419 HGYIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEEN 478
           HGYI E G  Q VRD RIT IYEG NGIQALDLVGRK+  +GG        EI  F    
Sbjct: 420 HGYIREWGQEQLVRDVRITQIYEGTNGIQALDLVGRKIVGSGGAFYKLFADEIRHFTATA 479

Query: 479 RADEKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQAL 538
            +D  L+ +TK L   +  L   T W +  A + P+  GA S +Y+  FG     YM AL
Sbjct: 480 NSD--LAEFTKPLNDAVGTLDELTEWLLDRAKSNPNEIGAASVEYLQAFGYTAYAYMWAL 537

Query: 539 MAKAASEALAAGSTSDEDFLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF 598
           MA+A     A G  S +DF  +KL TA+FY  R++P      A ++ G++++  L    F
Sbjct: 538 MARA-----ALGKESQDDFYASKLGTARFYFARLLPRIQSLSASVKAGSESLFLLEPGQF 592