Pairwise Alignments

Query, 598 a.a., acyl-CoA dehydrogenase from Agrobacterium fabrum C58

Subject, 596 a.a., Acyl-CoA dehydrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  604 bits (1558), Expect = e-177
 Identities = 308/599 (51%), Positives = 397/599 (66%), Gaps = 4/599 (0%)

Query: 1   MPVYKAPVKDTLFILNDVLGLERYNNLPGFEDATPDMIEAITGEAAKLAEERLFPLNLSG 60
           M  YKAP++D  ++L D+        LPG+E+ T D+I+ +  EAAK+ E+ L PLN  G
Sbjct: 1   MAGYKAPLRDMRYVLYDLFDGASLTTLPGYEEFTADLIDPVLEEAAKICEDVLQPLNRPG 60

Query: 61  DQQGCKRADDGSVSVPDGFKAAYDAYCEGGWIGLAVPSEFGGQGLPYTLHAAIGEYMSSA 120
           D++GC   ++G V  P GF  AY  + EGGW  +      GGQGLP  ++  I E + +A
Sbjct: 61  DEEGCV-LENGVVRTPKGFPEAYRTFREGGWTSITCDPAHGGQGLPQVVNTFIEEMICAA 119

Query: 121 NLSLMMYPGLTQGAIAAVLVHGTQEQKETYLPKMVEGTWSGTMNLTEPHCGTDLGLLRTK 180
           NLS  MYPGL+ GA  A+   GT++QK  YLP +V+GTW+GTM LTEP CGTDLGLLRTK
Sbjct: 120 NLSFGMYPGLSHGAYVALKQFGTEDQKARYLPALVDGTWTGTMCLTEPQCGTDLGLLRTK 179

Query: 181 AVPQGDGSYKISGQKIFISAGEHSMTDNIVHLVIARIEGAPEGTKGISLFIVPKFLVKED 240
           AVP G+G YKI+G KIFISAG+H +T+NI+HLV+AR+  AP+G KGISLF+VPK LV E+
Sbjct: 180 AVPDGEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGIKGISLFLVPKVLVTEE 239

Query: 241 GTLGERNGVTCGAIEHKMGIHGNATCVMNYDDATGYLLGAENKGLSAMFVMMNEARLGVG 300
           G LG+RN VTCGA+EHKMGI  ++TCV+N+D+ATG+L+G  +KG+ AMF MMN ARLGVG
Sbjct: 240 GALGDRNAVTCGALEHKMGIKASSTCVLNFDEATGWLIGEPHKGMRAMFAMMNTARLGVG 299

Query: 301 LQGLSVGEIAYQNAVEYARDRIQGRSLSGAKFPDKKADPIIVHPDIRRTLMTIKAYNEAG 360
           +QGL + E +YQ AV YARDR+QGRS SG K PDK ADP+IVHPD+RR L+T +A  E G
Sbjct: 300 VQGLGLAEASYQGAVAYARDRLQGRSPSGVKAPDKPADPLIVHPDVRRMLLTQRAIVEGG 359

Query: 361 RAFLLWTALQSDIAHRAADEKQRQAADDLLGLVTPILKGVLTDKGFDHAVMAQQVFGGHG 420
           RA   W  L  D  H A D   R  A + + L+TP++K +LTD G +   +  QVFGGHG
Sbjct: 360 RALAAWVGLALDRQHHAGDPATRAEAGEFVALMTPVVKALLTDLGSEATNLGVQVFGGHG 419

Query: 421 YIEEHGMSQYVRDARITMIYEGANGIQALDLVGRKLGMNGGRAVMALFKEIGDFCEENRA 480
           YI EHGM QY+RD RIT IYEG NGIQALDLVGRKL  N GR +   F  + D+ E    
Sbjct: 420 YIREHGMEQYIRDCRITQIYEGTNGIQALDLVGRKLPENAGRNLRRFFHPVADYIEARLD 479

Query: 481 DEKLSLYTKGLKKGLNDLQAATMWFMQNAMAKPDNAGAGSTDYMHLFGIVVLGYMQALMA 540
           D+ L+ +   L K    LQ AT    +  M KP  A A +TDY  L G   L Y+ A MA
Sbjct: 480 DDTLAEFVGPLAKTFVRLQQATAQVARVGMTKPAEAAAAATDYQRLLGFTALAYLWARMA 539

Query: 541 KAASEALAAGSTSDED-FLKTKLVTAKFYMERIMPETALRKARIETGADTMMELAAEAF 598
           + +     AG+  D D F   K+ TA+ +MER++P+T+   A I  G  ++      AF
Sbjct: 540 ELSLP--KAGTAEDNDAFHSAKVATARVFMERLLPQTSGLFATIMAGGRSLEAFPDAAF 596