Pairwise Alignments

Query, 242 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 235 a.a., DNA repair nuclease, ligase-associated (TIGR04123) (from data) from Caulobacter crescentus NA1000

 Score =  182 bits (462), Expect = 5e-51
 Identities = 98/225 (43%), Positives = 131/225 (58%), Gaps = 2/225 (0%)

Query: 17  CLGSETAIHGVAAWCDPLGGLYLPDLSLLVVSDLHLEKGAAFARR-GRMLPPYDTIATLK 75
           C G   A+  V       G L+L     L+V+DLH EKG+++A R G+MLPPYDT  TL 
Sbjct: 9   CGGLRVALANVEVMLRWSGALWLERERTLIVADLHFEKGSSYAARFGQMLPPYDTRETLD 68

Query: 76  ILSSLVSRYDPKIVVSLGDNFHDRVGSQHLPLPLRELIREMARGREWIWINGNHDPDGTV 135
            L   +++  P+ ++ LGD+FHD  G   L       +  +A GRE +W  GNHD DG  
Sbjct: 69  RLDREITQLAPRRLIFLGDSFHDAAGEARLASDDYRRLEGLASGRELVWAVGNHDADGPR 128

Query: 136 DLPGSSVDEMFYGNLVFRHEPKVGEAAGEIAGHLHPSATVRRREKTVRRPCFATDGSRLL 195
            LPG  +DE     L  RHEP  G   GE+AGHLHP+A V     TVRR CF TDG+RL+
Sbjct: 129 ALPGDVIDEASLAGLTLRHEPLPGAQPGEVAGHLHPAAKVSSGRATVRRRCFVTDGARLV 188

Query: 196 MPAFGVMSGGLDLRHQAMRGLFDHTALVAHLMGRDRIYSVRFSNL 240
           +PAFG  +GGL++  +A  GLFD   L A  +G  R+++V   +L
Sbjct: 189 LPAFGAYAGGLNILDEAFSGLFDGPVL-AGALGPQRVHAVGLKSL 232