Pairwise Alignments

Query, 216 a.a., two component response regulator from Agrobacterium fabrum C58

Subject, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score = 96.7 bits (239), Expect = 3e-25
 Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 18/206 (8%)

Query: 6   IIIADDHPLFRGALKQAVAGLDGQQTIIEAGDFEAARHAATTRNDADLMLLDLAMPGVSG 65
           +++ DDHPL R  + Q ++  +  + + EAG   A   A       DL+LLDL M G+SG
Sbjct: 5   VLLVDDHPLMRRGINQLLSFEEEFEVVAEAGS-GAEAIALAHDLQPDLILLDLNMKGMSG 63

Query: 66  FSGLMALRAEFSSLPIVIVSATDDATTVRRSIELGASGFISKSSGIDDIRDGIRAVLEGD 125
              L ALR +     +VI++ +D A  +   ++ GA G++ K    D   D + A+L+  
Sbjct: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLK----DTEPDQLVALLK-- 117

Query: 126 VWIPSGHQGEKEQDPDVAD-LIGRLRT------LTPQQSRVLGMLAEGLLNKQIAYELNV 178
                  QGEK     V   L+ R  T      LT ++ +++  +A+G  N+QIA  L +
Sbjct: 118 ----QAMQGEKAFSESVERYLLNREHTSNPFEALTEREMQIMSEVAKGYRNRQIADRLFI 173

Query: 179 SEATIKAHVSAILLKLKVDSRTQAVI 204
           SE+T+K H+ ++L KL V SRT A I
Sbjct: 174 SESTVKVHMKSLLKKLDVPSRTAATI 199