Pairwise Alignments

Query, 253 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  105 bits (261), Expect = 1e-27
 Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 10/228 (4%)

Query: 22  IRFLMSVDFPPFNFTDQEGRLAGFHVDLVREICAQLKVESKCQVQALPFDELEAALEMGE 81
           I+F+M   + PF + D+  ++ GF VDL   +C QL  E+KC      FD L  AL+   
Sbjct: 23  IKFVMEATYAPFEYMDENNQIQGFDVDLANALCKQL--EAKCSFHNQAFDSLIPALKFKR 80

Query: 82  GEAVISGLATTADLRKSFTFSRPYLLLPARLAVNKAGKFTGSGADALSGKKVGVVGNSRH 141
            +A IS +  T    +   FS PY    A   V+ AGK       AL GK+VGV   S H
Sbjct: 81  YDAAISAMDITEARLEQVNFSNPYYDNSAAF-VSLAGKVADQA--ALKGKRVGVQNGSTH 137

Query: 142 EQMLKAFFPKARVEGFDGYEPMYEALKTGKVDAIFADGLRLPFWVSGGASESCCALFGGP 201
           +  L           +  Y+  +  +K G++D++F D   +  W  G   ++  A  G  
Sbjct: 138 QSFLLEQLSDVVAVPYSSYQDAFIDMKNGRIDSVFGDTAVVAEWFKG---DNNLAYVGER 194

Query: 202 YMSDRFLGEGLSIMAVDPDN-ILVPAFDQALAALSRNGRLEEIYRRYF 248
             + ++ G G  I AV+ DN  L+   + AL A+  NG    I+ +YF
Sbjct: 195 VTNAQYFGNGFGI-AVNKDNQALLDQLNAALEAVKENGEYAAIFNKYF 241