Pairwise Alignments

Query, 253 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 63/238 (26%), Positives = 117/238 (49%), Gaps = 14/238 (5%)

Query: 22  IRFLMSVDFPPFNFTDQEGRLAGFHVDLVREICAQLKVESKCQVQALPFDELEAALEMGE 81
           +RF +   +PPF++T+ +G L GF VD+   +CA+++VE  C++    +D +  +L   +
Sbjct: 29  VRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAEMQVE--CKIVPQDWDGIIPSLLARK 86

Query: 82  GEAVISGLATTADLRKSFTFSRPYLLLPARLAVNKAGKFTGSGADALSGKKVGVVGNSRH 141
            +A+I+ ++ T + +K   F+  Y  +P +  + K G       + L G K+GV   + H
Sbjct: 87  YDAIIAAMSITEERKKKVDFTGKYAQIPNKF-IAKKGADLAFTKEGLKGVKIGVQRATTH 145

Query: 142 EQML-KAFFPKARVEGFDGYEPMYEALKTGKVDAIFADGLRLPFWV----SGGASESCCA 196
           ++ +   +     +  +  ++  Y  L  G++ A+  D   L   +     G A E    
Sbjct: 146 DKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYE---- 201

Query: 197 LFGGPYMSD-RFLGEGLSIMAVDPDNILVPAFDQALAALSRNGRLEEIYRRYFPYGLY 253
            F GP ++D ++ GEG+ I     D  L    D A+ AL   G  ++I  +YF Y +Y
Sbjct: 202 -FVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKGIYQQIQAKYFKYDVY 258