Pairwise Alignments

Query, 181 a.a., putative RNA polymerase sigma-70 factor from Agrobacterium fabrum C58

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Klebsiella michiganensis M5al

 Score = 58.9 bits (141), Expect = 5e-14
 Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 17  RGDRNALRVIFEREAGRLIAVAERIVKRRELAEEVVQESFVRIWTHAPQYRADHGSARGW 76
           +GD+ A  ++  R   ++ ++  R V   ++A+ VVQESFV+ W     +R D  +   W
Sbjct: 16  KGDQKAFNLLVVRYQHKVASLVSRYVPPGDIAD-VVQESFVKAWRALDSFRGD-SAFYTW 73

Query: 77  IYAIVRNRALNLL-----RDGSRELTVQDVETLRDSEQADEVVAAWQKL---DRNSRLYE 128
           +Y I  N A N L     R  S ++   D E         E+      +   +    ++ 
Sbjct: 74  LYRIAVNTAKNYLVAQGRRPPSSDVDANDAENFESGGALKEISNPENLMLSEELRQIVFR 133

Query: 129 CLGALDETKRQGILMAYVAGYSHGEIAGRLRVPLGTTKSWIRRGLSAL 176
            + +L E  R  I +  + G S+ EIA  +  P+GT +S I R   A+
Sbjct: 134 TIESLPEDLRMAITLRELDGMSYEEIAAIMDCPVGTVRSRIFRAREAI 181