Pairwise Alignments

Query, 188 a.a., transcription antitermination protein from Agrobacterium fabrum C58

Subject, 176 a.a., NusG antitermination factor (NCBI) from Rhodospirillum rubrum S1H

 Score = 58.5 bits (140), Expect = 6e-14
 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 26/186 (13%)

Query: 15  WFVVETKHKAEKAVEDALRKAGVK---------VFLPLETIGETVVRGRIIPAVSRPLLP 65
           W+V+      E  V  ++R+  ++         V +P E I E V RG  + A  R   P
Sbjct: 5   WYVIHVYSGFENKVAQSIREQAIQKGMDSRIEEVLVPTEEIVE-VRRGAKVNA-ERKFFP 62

Query: 66  GYVLVNIVYSPAAVCGIARLEGVAGFVGGMVHPHRVSDEEMNRF---KAFGDDETAPDVK 122
           GYVLV +  S      +     V GF+GG   P  +SD E  R       G +   P + 
Sbjct: 63  GYVLVKMDLSDETWHLVKNTAKVTGFLGGRGRPSPISDREAERILHQVQEGIERPKPSI- 121

Query: 123 HCEQFKRGDKVRFVLGPFASFGGNILKLRKDRAVDGERVATGAVVAVDVFGKVSTIEAPL 182
               F  G++VR   GPF SF G +  + +++A           V+V +FG+ + +E   
Sbjct: 122 ---TFDVGEQVRVCDGPFTSFNGMVEDVDEEKA--------RLKVSVSIFGRSTPVELEY 170

Query: 183 ALLEQL 188
           + +E++
Sbjct: 171 SQVEKV 176