Pairwise Alignments

Query, 342 a.a., phage-related integrase from Agrobacterium fabrum C58

Subject, 370 a.a., putative phage integrase from Phaeobacter inhibens DSM 17395

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 97/366 (26%), Positives = 153/366 (41%), Gaps = 42/366 (11%)

Query: 1   MVTVELKGIHTVKAK-GNVYYYAWRGGPRLD---GHPGTAAFMASYN--EAIANRME--- 51
           M  V +KG    K + G    Y    G ++D      G+A F A      AIA       
Sbjct: 1   MTQVRVKGFKIFKDRHGKQRCYHRETGHKVDLTDAPIGSAKFFAECETIRAIAEAQRAKA 60

Query: 52  PESGRFRSIITHYKATE-FKKLADSTKRVWSPWIDRISEHFGNLSIAQFNRT------DK 104
           P++G    +I  Y  TE ++ LA++T+R +    D + E   +  I   +        DK
Sbjct: 61  PKAGTLGGLIQSYFETEHYQNLAEATRRDYRKCADFL-EPIRDTPIHVIDTPLIAGIHDK 119

Query: 105 IRPRIRQWRGQYSDTPRAADTGMQVLSRILSHGVDPMGKLSANPAEG-IKHLYSSDRSEI 163
              +I  WR         A+    +LS +  + + P G +SAN A+  I      DR+  
Sbjct: 120 AAKKIG-WR--------RANMVRTLLSEVFRYNI-PKGLISANFAKDVIPKRRPRDRAYA 169

Query: 164 I--WTDADIAQVKAECSDEVKWVIDLAAHTGLRVSDLLKLSWSHVGPDAIIISTGKSRHK 221
              WT  +   V  +    V+  + L  +TGL  SD L+L    V    I    GK+   
Sbjct: 170 NRPWTIEERDTVLGKAKPHVRVALALMMNTGLDPSDALRLRNDQVDGGTIWGVRGKT--G 227

Query: 222 REAIIPRYDALNEILERIPKR-SPVILTSSKKKPWKPSGLNTMFWRAK---EKAKMLERD 277
            E  IP    L   L R+P   +  +L++S+ + W  +G +T++ R K   E   ++E+ 
Sbjct: 228 EEVAIPVSPTLQAALNRMPNHDAETVLSNSRGEAWTYNGFSTVWHRFKTALENEGLIEKG 287

Query: 278 LHFHDLRGTAATKFYNAGLSVRVIAEIMAWEEETVGKIIRRYVG------RNSATLEHIN 331
           L    LR T AT    AGL  R IA+++  +  ++ +   R            ATLE  N
Sbjct: 288 LTLKGLRHTVATTLREAGLDERRIADLLGQKTPSMARHYSRSANLANKNRETMATLEEEN 347

Query: 332 MLNSKS 337
              ++S
Sbjct: 348 RRRAES 353