Pairwise Alignments

Query, 494 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 465 a.a., Phosphate ABC transporter, permease protein PstC (NCBI) from Rhodospirillum rubrum S1H

 Score =  436 bits (1120), Expect = e-126
 Identities = 245/492 (49%), Positives = 319/492 (64%), Gaps = 33/492 (6%)

Query: 6   LLLILALIGIGS--YLLGRRRAVVLSGGRPSSMHSRAGYHGSYAVVWAVLPAAFILCAWL 63
           LLL+LA++ + S  Y  G RR++   GG+  ++HS  GY+G Y  +W  LPA F++ AW+
Sbjct: 4   LLLVLAVLALSSFAYAAGTRRSMRAVGGKLQTLHSLPGYYGLYVALWCGLPALFLMVAWV 63

Query: 64  VISPLLVTSAVRGDFPEDVRAQSEAQQSLTYGMVTSIARGLQRLAPEETAQVEADTAAVR 123
           +  P +V S V    P      +                    L PE    +  D A + 
Sbjct: 64  IFEPSVVHSLVLASLPPSALLDAAGTP----------------LPPERVRLLMTDIANI- 106

Query: 124 PLLASKGVAIAGEPQRFMVDAAQTLNAMTSTSRLGMIATVLLVAFAGAAYALRSIAPRFR 183
              AS  ++ + +P      A Q   ++ ST R  MIA  L +A AG+A+ L++IAPR R
Sbjct: 107 ---ASGNISSSTDPLIAQAGAYQA--SLQSTGRAIMIALTLALAVAGSAWGLKAIAPRMR 161

Query: 184 ARNRVERVILAALVVASSIAILTTIGIVLSMLTEAIQFFTMVPAHQFFFGTVWDPRFAA- 242
           ARN VE+V+   ++  S++AILTTIGIVLS++ E+ +FF  V    F FG  W P+ A  
Sbjct: 162 ARNTVEKVVKVFMIACSTVAILTTIGIVLSLVFESFRFFQQVSPIDFLFGLKWSPQVAMR 221

Query: 243 AGATDSSGQFGLIPLLAGTLYIGFVAMLVAVPVGLFSAIYMSEYATPRLRSVVKPLLEVL 302
           A    SSG FG +PL  GT  I  +AM+VAVP+GL SAIYMSEYA P  R+  KP LEVL
Sbjct: 222 ADQVGSSGAFGAVPLFVGTALISAIAMVVAVPIGLMSAIYMSEYAAPGFRAWAKPALEVL 281

Query: 303 AGIPTIVYGFFALTTVGPFLRDISTQINGLATGNYANFIQAQSVITAGFVMGIMLIPYVS 362
           AGIPT+VYGFFA  TV P +R     I GL        + ++S + AG VMGIM+IP+VS
Sbjct: 282 AGIPTVVYGFFAALTVAPAIRRWGESI-GLD-------VSSESALAAGLVMGIMIIPFVS 333

Query: 363 SLSDDIITAVPRSLRDGSLGLGATRSETIKKVIVPAALPGIVGAVLMTASRAIGETMIVV 422
           SLSDD+ITAVP+S+R+GS GLGAT+SETI++VI PAALPGIVG +L+  SRAIGETMIVV
Sbjct: 334 SLSDDVITAVPQSMREGSYGLGATKSETIRRVIFPAALPGIVGGILLAVSRAIGETMIVV 393

Query: 423 LAAGVAARLQLNPFEPMTTVTVKIVSQLTGDLEFTSPQTLVAFALGITLFAITLCLNIYA 482
           +AAG+AA L  NPFE +TTVTV+IV+ L GD EF SP+TL AFALG+ LF +TL LNI A
Sbjct: 394 MAAGLAANLTANPFEAVTTVTVQIVTLLVGDQEFDSPKTLAAFALGLVLFFVTLILNIIA 453

Query: 483 LYIVRKYREQYE 494
           L++VRKYREQY+
Sbjct: 454 LHVVRKYREQYD 465