Pairwise Alignments

Query, 320 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 359 a.a., hypothetical dioxygenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 84/338 (24%), Positives = 134/338 (39%), Gaps = 55/338 (16%)

Query: 10  LRLPVIASPLFIISHPQLTLAQCKAGVIGAFP-------ALNAR---------------- 46
           +  P+I +P+  +    L +A  +AG +G+ P       AL A                 
Sbjct: 11  IEFPIIQAPMAGVQGSALAIAVSEAGGLGSLPCAMLSLEALEAELTAIRSQTAKPINVNF 70

Query: 47  -----PESQLDEWLAMITEELAAYNRANPERPAAPFAVNQIVHMSNRRLEHDLGLCVKYK 101
                P +Q  +  A + E+LA Y       P A  A  Q    S  + E    +  K+K
Sbjct: 71  FCHREPVAQAAKQAAWL-EQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAE----VLAKFK 125

Query: 102 VPVVISSLGAVP--EVNAAVHSYGGIVLHDVINDRHARSAIRKGADGLIAVAAGAGGHAG 159
            P V+S    +P  E+   + S+G  V+        A     +GAD +IA    AGGH G
Sbjct: 126 -PEVVSFHFGLPDEELLLEIKSWGSKVISTATTVEEALWLEARGADAIIAQGLEAGGHRG 184

Query: 160 ---------TLSPFALIQEIREWFDGPLLLAGAIANGGSILAAQAMGADMAYIGSPFIAT 210
                     L  F+L+ +I    + P++ AG I +  ++ AA  MGA    +G+ ++  
Sbjct: 185 HFLSEDLTEQLGTFSLLPQIIAAVEIPVIAAGGIVDATTVRAAMTMGASAVQVGTAYLLC 244

Query: 211 EEARASDGYKQALVDAQAKDIVYSNYFTGVHGNYLKSSIVASGMDPDN-----LPEADPS 265
            E   S  +++AL    A+    +N F+G     + +  +A  M P N      P A  +
Sbjct: 245 PECNTSAIHREALQSDAAQHTALTNLFSGRPARGIVNRFMAE-MGPMNEAVPDFPLASSA 303

Query: 266 KMDFETATGGAKAW--KDIWGAGQGIGAIKAVEPVAAL 301
                TA      W    +W  GQ     +A+ P A L
Sbjct: 304 VAGLRTAAERLGFWDFSPLW-CGQNASGCRAI-PAADL 339