Pairwise Alignments

Query, 558 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 78.6 bits (192), Expect = 8e-19
 Identities = 122/587 (20%), Positives = 228/587 (38%), Gaps = 98/587 (16%)

Query: 24  LGLSLLAVCGAMVPVLALVSQAVQGSEGLWDH------LGATVLWTALPDTAILLAGVGL 77
           + + LL V   + P +A+     +   G W        L  +   T + ++  L   VG+
Sbjct: 153 ISIILLIVIFIVYPSIAIFLPMFKDDMGNWTAWQFMTILSQSHTLTVIYNSIALGIAVGV 212

Query: 78  LAGVVGTSAAWLVTAYDFPGRRVLEWALLLPLAMPTYIVAYAYLDILHPIGPVQGAI--- 134
            A   G   A   T        +     +LP+  P +IV      +L   G +   +   
Sbjct: 213 GATFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELMVDG 272

Query: 135 ------RWLLGYSSPREFRLPDIRSTVGCIVLLGFVLFPYVYIPVRAMFLTQA-----GN 183
                  WL G++                 + L  VL    + P+  M L  A      +
Sbjct: 273 FGLQKTNWLYGFTG----------------IWLAQVL---AFAPMSFMILDGALKSLHPS 313

Query: 184 LLEVARTLGVSRRAAFFKVAVPLARPAIAVGVSLALMEALNDIGASEFLG--VRTLTVSV 241
           L E + TL  +R   FF + +PL +PA+A    +  +++L D      LG     L   +
Sbjct: 314 LEEASYTLKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGGSFDVLATQI 373

Query: 242 YTTWVTKSDLPGAAQIALS---MLFIVVALVALERWARRKQRYSVSAQKSR-ELEPLRLT 297
           Y  ++  + L  A+   L    +LF +   V    W  ++   ++S +  R +++ +  +
Sbjct: 374 Y-FYIAGAQLDYASASTLGSVLLLFSLAIFVVQYLWIGQRSYVTISGKAYRGDVQEMPAS 432

Query: 298 GPRG-------WAAFTLGSLPVLIGFVGPASY---------LVIEAWKRFRFSGLSVRFA 341
              G       W  F +    +L G +   S+         L  + +     +G+S    
Sbjct: 433 LKLGVTVTLYAWMIFNV----LLYGSIFFGSFTVNWGVDYTLTFKNYLNLFGNGMSDGAW 488

Query: 342 DEAVNTIVFAGLATLITLILGLAVAYAMRLAPGRLSLWSYRL----STVGYAAPGTVIAI 397
              + T+++AG+A  IT + GL +AY +     R   +  ++    + + +A PGTV  +
Sbjct: 489 PSLITTMIYAGVAAPITALFGLLIAYVV----VRQQFYGKKVIEFSTMLCFAVPGTVAGV 544

Query: 398 GVLIALGGFDRFVDQTMRDWFGISTGLIFIGSGAALIYAYSARFLTIAAGGVDAGLSRIP 457
             ++A                     +   G+ A ++ +   R + +      AGL ++ 
Sbjct: 545 SYILAFN----------------DAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLD 588

Query: 458 HSFDHASRTLGRSATQTFRQIHLPLSKASLAAAALLIFVDCVKELPATLLLRPLNFETFA 517
            S D AS +L  S+ QT R I LPL + ++ +  +  FV  +  + A + L         
Sbjct: 589 KSLDEASLSLRASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFLVTPETRVAT 648

Query: 518 THLYGEAARGTYEEASIAALAIVVIGMLPVVLL-------ARIGRRK 557
           +++      G Y  A IA  +++++ ML ++LL       AR+ R K
Sbjct: 649 SYILNRVEDGEYGIA-IAYGSVLIVVMLAIILLFDLLVGEARVSRSK 694