Pairwise Alignments

Query, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

Subject, 558 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella amazonensis SB2B

 Score =  589 bits (1518), Expect = e-172
 Identities = 301/556 (54%), Positives = 401/556 (72%), Gaps = 9/556 (1%)

Query: 16  KRWLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYRELDADTRAVA 75
           K W+   P  VP+EI A    SL+D+ E++ + +AD+ AF +MG  LTYR+L+  +RA A
Sbjct: 3   KPWINHLPHDVPAEIDAGRFDSLVDMFEQAVRDYADQPAFINMGAVLTYRKLEERSRAFA 62

Query: 76  AWLQSR-GLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELEHQLKDSGA 134
           A+LQ+  GL+KGDRVA+MMPN+LQ P+A++G+LRAG+VVVNVNPLYTPREL+HQL DSGA
Sbjct: 63  AYLQNELGLKKGDRVALMMPNLLQYPIALFGVLRAGLVVVNVNPLYTPRELKHQLIDSGA 122

Query: 135 KALFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGL-KGHIVNLVVRKVKKLVPAHAIPG 193
           K + V+ NFA   ++ V  T V  V++  +GDLL   K  +VN VV+ +KKLVP + +P 
Sbjct: 123 KTIVVVSNFARTLEEVVDDTPVESVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDLPH 182

Query: 194 SISFKAMLKEGQGVSLKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHANLLANKAQIS-LW 252
           +ISF++ L++G+ +      L    +AFLQYTGGTTGVSKGA+L+H N++AN  Q +  +
Sbjct: 183 AISFRSALQKGRRMQYVKPELDIDTLAFLQYTGGTTGVSKGAMLSHGNVVANVLQANGAY 242

Query: 253 LDAAFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIPGFVKELS 312
                +G++        + ALPLYHIFALTVN L+ +  G  NLLI NPRDIP F+ +L 
Sbjct: 243 APLLADGKEF------VVTALPLYHIFALTVNCLLFLHKGAQNLLITNPRDIPAFISDLR 296

Query: 313 HYQPHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVVGCPITEG 372
            Y      G+ TLFNAL+NNEEF +LD S L   +GGGMAVQR VA++W S+    + EG
Sbjct: 297 KYPFTALTGVNTLFNALVNNEEFTQLDFSRLKLSIGGGMAVQRAVADKWQSITKTRLLEG 356

Query: 373 YGLSETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICIRGPQVMA 432
           YGL+E SP+      +   ++G+IG P  ST + +RD+DGN LP GE GE+  +GPQVM 
Sbjct: 357 YGLTEASPLVACCPYNLEGYNGSIGFPAPSTLMQVRDDDGNVLPQGETGELFAKGPQVMK 416

Query: 433 GYWQRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPNEVEEVAA 492
           GYWQRP+ET K I A+G+  +GD+G+MDE+G+  IVDRKKDMILVSGFNV+PNEVE+V A
Sbjct: 417 GYWQRPEETTKVIDANGWLATGDIGYMDEQGFFYIVDRKKDMILVSGFNVFPNEVEDVVA 476

Query: 493 SHPGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTNYKRPKIIEFRTD 552
            HP V+E AAIGVP++ SGE VK+FVV KD+SLTE+++   C  +LT YK PK++EFR +
Sbjct: 477 MHPKVIEVAAIGVPNDASGEIVKVFVVAKDKSLTESDVIKHCKHHLTGYKVPKLVEFRDE 536

Query: 553 LPKSNVGKILRRELRN 568
           LPK+NVGKILRRELRN
Sbjct: 537 LPKTNVGKILRRELRN 552