Pairwise Alignments

Query, 570 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  587 bits (1513), Expect = e-172
 Identities = 305/554 (55%), Positives = 403/554 (72%), Gaps = 9/554 (1%)

Query: 18  WLASYPPGVPSEIPASANASLIDLLEKSCKQFADRKAFSSMGKSLTYRELDADTRAVAAW 77
           W+   P  VP+EI A   +SL+D+ E +  ++AD+ AF +MG +LTYR+L+  +RA AA+
Sbjct: 5   WINHLPKDVPAEINADQYSSLVDMFETAVAKYADQPAFINMGATLTYRKLEERSRAFAAY 64

Query: 78  LQSR-GLEKGDRVAVMMPNILQNPVAVYGILRAGMVVVNVNPLYTPRELEHQLKDSGAKA 136
           LQ+   L+KGDRVA+MMPN+LQ P+A++GILRAGMVVVNVNPLYTPREL+HQL DSGAKA
Sbjct: 65  LQNELKLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLVDSGAKA 124

Query: 137 LFVLENFAHVAQQAVPKTAVRHVVVAAMGDLLGL-KGHIVNLVVRKVKKLVPAHAIPGSI 195
           + V+ NFA   ++ V +T V+ V++  +GDLL   K  +VN VV+ +KKLVP + +P ++
Sbjct: 125 IVVVSNFARTLEEVVDQTPVKSVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDLPHAL 184

Query: 196 SFKAMLKEGQGVS-LKPVGLTAQDIAFLQYTGGTTGVSKGAVLTHANLLANKAQISLWLD 254
           S +  L  G+ +  +KPV +T  D+AFLQYTGGTTGVSKGA+LTH N++AN  Q +    
Sbjct: 185 SMRETLSRGRRMQYVKPV-ITGDDLAFLQYTGGTTGVSKGAMLTHKNVVANVLQANGAYS 243

Query: 255 AAFNGRKDRPEVLNFICALPLYHIFALTVNSLMGIALGGHNLLIANPRDIPGFVKELSHY 314
            A    +D  E +  + ALPLYHIFALTVN L+ +  G  NLLI NPRDIPGFV EL  Y
Sbjct: 244 PAL---RDGNEFV--VTALPLYHIFALTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKY 298

Query: 315 QPHIFPGLTTLFNALMNNEEFRKLDLSSLIFVLGGGMAVQRPVAERWVSVVGCPITEGYG 374
                 G+ TLFNAL+N+ +F +LD S L   +GGGMAVQ+ VA++W S+    + EGYG
Sbjct: 299 PFTALTGVNTLFNALVNSSDFAELDFSRLKLSIGGGMAVQKAVADKWQSITKTRLLEGYG 358

Query: 375 LSETSPVATVNRLDAAEFSGTIGLPISSTEIDIRDEDGNSLPTGEVGEICIRGPQVMAGY 434
           L+E SP+ T    +   ++G+IG P  ST I +RD+ GN LP GE GE+  +GPQ+M GY
Sbjct: 359 LTEASPLLTCCPYNLDGYNGSIGFPAPSTLIQVRDDAGNVLPQGETGELFGKGPQIMKGY 418

Query: 435 WQRPDETAKAITADGFFRSGDMGFMDERGYTKIVDRKKDMILVSGFNVYPNEVEEVAASH 494
           WQRP+ETAK I  DG+  +GD+G+MDE+G+  IVDRKKDMILVSGFNV+PNEVEEV A H
Sbjct: 419 WQRPEETAKVIDKDGWLATGDIGYMDEQGFFYIVDRKKDMILVSGFNVFPNEVEEVVALH 478

Query: 495 PGVLECAAIGVPDEHSGETVKLFVVKKDQSLTEAELKAFCAKNLTNYKRPKIIEFRTDLP 554
           P V+E AA+GVP++ SGE VK+FVV KD+SLT  ++   C  +LT YK PK++EFR +LP
Sbjct: 479 PKVIEVAAVGVPNDASGELVKVFVVAKDKSLTADDIIKHCRAHLTGYKVPKLVEFRDELP 538

Query: 555 KSNVGKILRRELRN 568
           K+NVGKILRRELR+
Sbjct: 539 KTNVGKILRRELRD 552