Pairwise Alignments

Query, 430 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 434 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 63.9 bits (154), Expect = 9e-15
 Identities = 71/303 (23%), Positives = 126/303 (41%), Gaps = 26/303 (8%)

Query: 142 GKQYGLPVNASSPIIYINSDLVTKAGGDPDKMPTTFPELIALAKKIKALDPKFAGMSYDI 201
           GK  G+P N+S+P++Y N D++        + P T+ +L  +A K+   +   AG +  +
Sbjct: 135 GKMVGMPFNSSTPVLYYNKDMLASVNA---QAPQTYEQLEQVAAKL--AEKGQAGFAQSL 189

Query: 202 NGWPDDWLWQA-----LVVEQGGKLVDDKTKTVAFDNEIGLNALKMTRQFVTEGGQNLL- 255
             W     +++     L  +Q G    D +  + F+++  L  +K  +++  +G      
Sbjct: 190 TPWIMFENFKSRHNLPLSDKQNG--YQDLSTKIMFNSDDMLMHVKKLKEWSDKGYYKYYG 247

Query: 256 -DWDQSRQQFGAGLTGFIFSTPAHVQTIQGLVGDRFKLKTATFPL-DNKEKGGVPT--GG 311
            DWD ++  F  G       +      ++  V  +F L T   P  ++  K    T  GG
Sbjct: 248 SDWDANQTPFERGEVAMWMGSSGSFGGLRNRV--KFNLGTTYLPYWESVTKNPTHTFIGG 305

Query: 312 NSAVILTQEKAKQD-AAWKYLKWITGPEAQNTIVRITGYLPTNKLATGPDFLAPYYVENP 370
            +   L      QD     +  ++T PE Q    + TGY+P    A      + YY ENP
Sbjct: 306 AALFALQGHTPAQDKGVAAFFAYLTKPETQMNWHKTTGYVPVTNAAYDLTKQSGYYQENP 365

Query: 371 NVKTASLQADRSLP---WA-GYPGGDSVRIWRTQRDIIGTVMRGEVTPEAGLKQIVEQTN 426
           + +    Q   SLP   W  GY  G   ++          +  G  T E+ L ++ +++ 
Sbjct: 366 DAEVGVKQL--SLPDGEWTKGYRLGYYPQVREVMHREFDNIFSGRSTVESSLNKVEDESA 423

Query: 427 ALL 429
            LL
Sbjct: 424 KLL 426