Pairwise Alignments

Query, 430 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 434 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 89/404 (22%), Positives = 158/404 (39%), Gaps = 37/404 (9%)

Query: 35  LYNLPGFTKFHQPLADEFMKKNP--DVKINFLAPAAGYNEGQQQVLRSAVTGNLPDVYFS 92
           L  +P + K  + +A ++  ++   D+++ FL      NE  +  L + +  +    +F 
Sbjct: 44  LETVPAYVKMWEDIAAKYESEHAGVDIQLQFLE-----NEAFKAKLPTLLQSDDAPHFF- 97

Query: 93  GYNLTAELVHTLAPRNQITDLGPFIQAEGGQAFLDKNYSPKMAALGQIDGKQYGLPVNAS 152
            Y+    ++   +    + DL   ++A+GG    +K+Y+P        D + Y +P    
Sbjct: 98  -YSWGGGVLKQQSETGALMDLTEAMRADGGA--WEKSYNPAALKGFTFDDRIYAVPFKMG 154

Query: 153 SPIIYINSDLVTKAGGDPDKMPTTFPELIALAKKIKALDPKFAGMSYDINGWPDDWLWQA 212
           +   + N +L  K G   + + T    L A+    +A     AG   D   WP  + W  
Sbjct: 155 TISFFYNKELFQKGGVKAEDIKTWDDFLTAVKTLKEAGITPIAGGGGD--KWPLHFYWSY 212

Query: 213 LVVEQGGKLVDDKTKTVAFDNEIGLNALKMTRQFVT-------EGGQNLLDWDQSRQQFG 265
           LV+  GG+ V +  K    +  +    +K   Q          +GG    +W Q+   FG
Sbjct: 213 LVMRNGGQQVFEDAKNNEGEGFLQPAIIKAGEQLAELGKLEPFQGGYLGANWPQTLGLFG 272

Query: 266 AGLTGFIFSTPAHVQTIQGLVGDRFKL---KTATFPLDNKEKG-GVPT---GGNSAVILT 318
            G    I S      T +   GD   L       FP    E G G  T   GG +   +T
Sbjct: 273 DGKAAMILSFENTEATQRANSGDGKGLAAENIGRFPFPAVEGGAGAATDTLGGLNGWAVT 332

Query: 319 QEKAKQDAAWKYLKWITGPEAQNTIVRITGYLPTNKLATGPDFLAPYYVENPNVKTASLQ 378
           +    +  A  +L+++T  E +  +  +   +P    A G    A   V NP V+ ++ Q
Sbjct: 333 KNAPPE--ALDFLRYLTNAENERLMASVGMIVPA---AAG----AEDGVTNPLVRASADQ 383

Query: 379 ADRSLPWAGYPGGD-SVRIWRTQRDIIGTVMRGEVTPEAGLKQI 421
              S     Y   D    + R   D    ++ G+++ E G + I
Sbjct: 384 LAASTWHQNYFDQDLGPSVGRVVNDASVEIVSGQMSSEEGARMI 427