Pairwise Alignments

Query, 308 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  132 bits (332), Expect = 1e-35
 Identities = 87/278 (31%), Positives = 148/278 (53%), Gaps = 12/278 (4%)

Query: 29  GLMFAAPAGLLLLAIYIVPMFVLAGFSVTDYRLGALSTRFIGLGNFVKAFQDPVFLRALA 88
           G +F APA  L+    + P+      S    R   ++ +F G  N V+ + DPVF++AL 
Sbjct: 16  GWLFVAPALGLITLFMVYPIAWSLWMSFQSGR--GMTLKFAGFANIVRLWNDPVFIKALT 73

Query: 89  NTALYAIIVIPFGVFLALGVALLVYN-RKRSRTFWEVAYFLPVTATLVAMATVWQFLLHP 147
           NT  Y ++ +P  + LAL +A L+ N R   R  +  A FLP  ++LVA + +++ +   
Sbjct: 74  NTMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMFAT 133

Query: 148 SLGPVNAAIKWLGF--EPVAFLSNPVLLIPTMALMGIWQVLGFNMVLFLAGLTAISKDLH 205
             G VN+ ++ +G    P+ +L++P      + L   W+  G+NM+ +LA L  I K ++
Sbjct: 134 D-GIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLAALQNIDKSIY 192

Query: 206 EAARLDGAKNPVDRFLTVTWPMLGPTTMFVVVTTSISAFKVFETVAVLTKGRSG--SETL 263
           E AR+DG      R   +T P+L P  +F  V ++I   ++F+ V  LT+G+ G  + TL
Sbjct: 193 EVARIDGVP-AWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGGPSNATL 251

Query: 264 LFDLYLEGFEY---SNTGYAAALTIIFLVIVLILSIGQ 298
              LY+    +    N GYAA ++ + +V+V +L+  Q
Sbjct: 252 TLSLYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFVQ 289