Pairwise Alignments

Query, 491 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 639 a.a., cache domain-containing protein from Methanococcus maripaludis S2

 Score = 78.2 bits (191), Expect = 8e-19
 Identities = 83/357 (23%), Positives = 163/357 (45%), Gaps = 34/357 (9%)

Query: 147 IRVFDVVGDSDTII--ELVLGENKLR-AAMLAYARNVFLISIVLSLVTAGLIFISINRIM 203
           +  ++ + DSD  I   L +G  + +  A+ A  RN   +  ++ L+ A ++   INR +
Sbjct: 281 LTAYEPIYDSDNKIIGMLFVGTPESKFLALQADVRNQTFVVGLIGLLIALIVSYLINRGI 340

Query: 204 IRPIRRLTLGMQNFSEDPGNPERIFVPEEGTDELSVAGRHLADM-----------QTELQ 252
           I+P+ +L  G +  S    + + I   ++   EL+ A   +A               EL+
Sbjct: 341 IKPLEQLKQGAEWVSNGRYDQKVIVDSDDEFGELAKAFNKMATQINISDDKLKKHAEELK 400

Query: 253 KTLRQQKNLVDL-GLAVSKINHDMRNILSSAQLMSDRLVDAKDPMVRSFAPKLLRTIDRA 311
            +  + K L  L    ++ ++H++R  L+S +   + ++D     +     K L+  D  
Sbjct: 401 ISYNELKELDKLKSELIAVVSHELRTPLTSIKGYVELVLDGTMGAINDSQKKCLQVADDN 460

Query: 312 VAYTGEV------LAYGQATEGAPKRKIVPLSLLVRDVRDILA-LDPDSGIEFHDSVPPD 364
           +     +      L+  +  E    R+ V L  +V DV + L  L  +  I+ +  V  D
Sbjct: 461 IVRLRRLIESMLDLSKIERGELEMYREKVNLRSIVCDVIEYLKPLATEKNIKLNKEVE-D 519

Query: 365 LTVDADSEQLFRVIHNLCRNAVQALQSDVANSAPRHLSISAQRAGSVVSIVIDDNGPGMP 424
           + ++AD +++ +V+ NL  NA++       + A   + +S       + + + D G G+P
Sbjct: 520 IAIEADKDRITQVLTNLIENAIKF------SPANESILVSGVLEDEHIHLKVTDRGAGIP 573

Query: 425 RKAKENLFSAF-----RGSARSGGTGLGLVIARELVLAHGGTIALVEKPGPGTQFRI 476
           +K  E +F+ F         + GG+GLGL + + +V AH G+I +  + G G+ F I
Sbjct: 574 KKDMEKIFNRFYQVDSSTKRKKGGSGLGLAVCKSIVEAHKGSIWVESELGKGSTFHI 630