Pairwise Alignments

Query, 266 a.a., tRNA pseudouridine synthase I from Agrobacterium fabrum C58

Subject, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis S2

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 34/244 (13%)

Query: 8   VEYDGTPYYGWQRQENGPSVQGALEAAVRSL----TGESVSIRGAGRTDSGVHAVGQVAH 63
           + YDG     +Q Q +G +V   +  A+         + V +   GRTD GV A+G   +
Sbjct: 6   IAYDGK--LSFQTQPHGETVCDKISNALLDCGYLDNKDRVPLYHGGRTDRGVAALGN--Y 61

Query: 64  IDLSRDWEPYKLRNALNAHLAMAGEAVAVLDAAAVTEDFDARFSALRRHYLYRIICRKSR 123
           +    D +P   R  + + L   G  V       +  + +       RHY Y +      
Sbjct: 62  VVYEMDKKPVLPR--VQSKLKWDGIWVLGCKKIEIFPEIE------HRHYQYTL------ 107

Query: 124 LALEHKRAWWVSKDLDHERMHEAAQMLVGRHDFTTF-RSVHCQANSPVRTLDRLDVTRNG 182
                      +K+ D E M +A++ L+G H F    +    +   PVRTL  + ++ N 
Sbjct: 108 ----------PNKNHDVELMKKASEKLIGTHYFQNLSKRDKTKVKDPVRTLYDIKISSND 157

Query: 183 DLIEIRATAQSFLHNQIRSFAGTLKLAGEGGM-TPDDVRAALEARDRKACGPVAPPDGLY 241
             I I    +SFL N +R     L   G+  +  P+     + + D K   P +P +GL 
Sbjct: 158 YFITIDIFGESFLWNMVRRIIRLLSDIGKHKIENPEKFIELILSEDYKKGYPPSPAEGLI 217

Query: 242 FMQV 245
            + V
Sbjct: 218 LVDV 221