Pairwise Alignments

Query, 170 a.a., polypeptide deformylase from Agrobacterium fabrum C58

Subject, 168 a.a., peptide deformylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  113 bits (282), Expect = 2e-30
 Identities = 59/169 (34%), Positives = 103/169 (60%), Gaps = 6/169 (3%)

Query: 3   IKPLIILPDPVLRQQSKLIEQVDAEVLRLADDMLETMYDAPGIG----LAAIQIGVPRRM 58
           I+P +  PD  LR  +  + ++  E+  + DDM++TM   PG+G    LAA QIGV + +
Sbjct: 2   IRPFLSWPDARLRTPAAPVAEITDEIRTVWDDMIDTMEAMPGMGPGAGLAAPQIGVMQAL 61

Query: 59  LVIDVAREGEEKTPVVFINPEILKVSDDISTYEEGCLSIPDYYAEVERPASLTVQYVGRD 118
            V+D + E      +   NP++L  S  + ++EE   ++P  +A+++RP ++TV+++  +
Sbjct: 62  AVVDASEE--RGRAIRMANPQVLHASAQLRSHEEASPNLPGVFAKIDRPRAVTVRFLDAN 119

Query: 119 GKQQTVEADGLLATCLQHEIDHLNGVLFIDHISRLKRDMVIKKFTKAAR 167
           G  +  +  GL AT +QH+IDHL G ++ D +S+ KRDM+++K  K AR
Sbjct: 120 GAVKEQDFVGLWATSVQHQIDHLAGRMYFDRLSKTKRDMLLRKARKLAR 168